KEGG   Pseudonocardia autotrophica: Pdca_68150
Entry
Pdca_68150        CDS       T06156                                 
Symbol
pcnB
Name
(GenBank) CCA tRNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
paut  Pseudonocardia autotrophica
Pathway
paut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pdca_68150 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paut03019]
    Pdca_68150 (pcnB)
Enzymes [BR:paut01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Pdca_68150 (pcnB)
Messenger RNA biogenesis [BR:paut03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Pdca_68150 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 AbiEii
Other DBs
NCBI-ProteinID: BBG05606
Position
complement(7224593..7226095)
AA seq 500 aa
MTSAQTSHPPAGAGRESGPGPDPEELQRSQENAVMQMLDVPAVADELAARFAARGHRIYL
VGGSVRDALLRGTGASDRDSGDLDFTTDARPEQILEAVRGWADAVWDTGIAFGTVGLRRR
DQVIEVTTFRADTYDGRSRNPEVRFGDDIEGDLIRRDFTVNAMAVELGERRFVDPHGGFA
ALAQGLLDTPDLPERSFADDPLRMLRAARFVSQLGFTPADRVIAAMTGMAGELSRITAER
VQAEFSKLILGAHPRRGIELLCDTGLAQHVVPEVPAMQLETDEHMQHKDVYTHSLVVMEQ
AIERETDGPDLTLRLAALLHDIGKPATRRKEPDGRVSFHHHEVVGAKMTRKRLRALKYPK
VLIDDVSQLVYLHLRFHGYGKGEWSDSAVRRYVTDAGPLLERLHRLVRSDCTTRNRRRAS
ALQRNYDGLEDRISELRKQEELDAIRPDLDGNQIMELLGIPPGRAVGRAYQHLLALRMEQ
GPLSPEQAEAALRAWAAGNL
NT seq 1503 nt   +upstreamnt  +downstreamnt
gtgacctccgcacagacctcgcatccgcccgcgggtgccggtcgggagtccggccccggg
ccggacccggaggagctacagcgctcccaggagaacgccgtgatgcagatgctcgacgtg
ccggccgtcgccgacgagctggcggcccggttcgccgcgcgcggacaccggatctacctg
gtcgggggcagtgtccgggacgcgctgctgcgcgggacgggtgcatcggaccgggattcc
ggcgacctggacttcaccaccgacgcccggcccgagcagatcctggaggcggtccgcggc
tgggccgacgcggtctgggacaccgggatcgccttcggcaccgtcgggctgcgccgccgc
gatcaggtgatcgaggtgacgacgttccgcgccgacacctacgacggccggtcccgcaat
cccgaggtccggttcggcgacgacatcgagggcgatctgatccggcgcgacttcacggtc
aacgcgatggccgtcgagctcggggagcgccggttcgtcgacccgcacggcgggttcgcc
gcgctcgcccagggcctcctcgacaccccggacctgccggagcgctcgttcgccgacgat
ccgctgcggatgctgcgggccgcccggttcgtgtcccagctcggcttcaccccggccgac
cgggtgatcgcggcgatgaccgggatggccggcgagctgtccaggatcaccgccgagcgg
gtgcaggccgagttctccaagctgatcctcggcgcgcacccgcggcgcgggatcgagctg
ctctgcgacaccgggctggcccagcacgtggtccccgaggtcccggcgatgcagctggag
accgacgagcacatgcagcacaaggacgtctacacgcactcgctggtcgtgatggagcag
gcgatcgagcgcgagaccgacggcccggacctgacgctgcggctggcggcgctgctgcac
gacatcggcaagccggccacccggcgcaaggagccggacggccgggtcagcttccaccac
cacgaggtggtgggcgcgaagatgacccgcaagcggctgcgcgcgctgaagtacccgaag
gtgctgatcgacgacgtctcccagctcgtctacctgcatctgcggttccacggctatggc
aagggcgagtggagcgactccgcggtgcgccgctacgtcaccgacgccggcccgctgctc
gagcggctgcaccggctggtccggtcggactgcaccacccggaaccggcggcgggcgtcg
gcgctgcagcgcaactacgacggcctggaggatcggatcagcgagctgcgcaagcaggag
gagctcgacgcgatccgcccggacctggacggcaaccagatcatggaactgctcggcatc
ccgcccggccgggcggtgggccgggcctaccagcacctgctcgcgctgcggatggagcag
ggtccgctgagcccggagcaggccgaggcggcgctgcgggcctgggctgccggcaacctc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system