KEGG   Prunus avium (sweet cherry): 110744865
Entry
110744865         CDS       T05161                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110744865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110744865
   03036 Chromosome and associated proteins [BR:pavi03036]
    110744865
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110744865
   Coactivators
    SAGA/TFTC/STAGA complex
     110744865
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110744865
    STAGA complex
     110744865
    TFTC complex
     110744865
    SAGA complex
     110744865
    SLIK complex
     110744865
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 110744865
NCBI-ProteinID: XP_021800591
UniProt: A0A6P5RIG8
Position
Unknown
AA seq 631 aa
MAESGPSSSPKPLQPSNPNSIDPTAASTAAATNIIINQNPSNSSSNPPIPSPSALAQSPQ
ISSPPLPPLSNISLPQNQHITPTVGLDYTQKLNQQPQQHQSQSLVQQSQNVNVNSMSNYQ
LQQTLQRSPSMSRVNQLQQQTQNQQQQHFGMMRQQGGSYPQVNFGGSGAIQQQNQLQQQN
QSQQSQQQIGGGNLSRSALMGQSGHLPMLSSAAAVAAAQFTLQPQMLASPRQKGGLVQGS
QFHAGNSPAQSLQGTQAMGMMGSINLGSQLRANGLASYAQQRMNPGQLRQQLARQSSLTS
AQVQSLPRTSPLAFMNPQPSGLTQNGQPAMLQNSLSPQWLKQMPTISGPGSPSLRLQQQR
QQQVLYQQQLASQKSMPLNQQQFSQLVQQQQQLSHPQLQQQQQLQQLQQHQQQQQQIQQQ
SQQQPLNQQQQNSPRMAVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKR
KIQDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSNLESKDVLLHLE
KNWNLTIPGFSSEERKYQNKSLSSDLHKKRLDMIRTLMESSHLETNTNNPKEMMRGFGNP
VGANHLRPSLGAEQLVSQSTGSQMLQQMTRF
NT seq 1896 nt   +upstreamnt  +downstreamnt
atggctgaaagtggcccatcttcatccccaaaacccctgcaaccctcaaaccccaacagc
attgacccaactgcagcatcaacagcagcagccacaaacattataattaaccaaaaccca
tcaaactcttcctcaaacccaccaattccatccccttcagctctcgcccaatctcctcaa
atctcatcccctcccctccctcctttgtccaacatctctctccctcaaaaccaacatatt
acacccactgttggattagattacacacaaaaattgaaccaacagccgcagcaacatcaa
tctcagtcattggtgcaacaatcccagaatgtgaatgtgaattccatgtccaattaccag
ctccagcagaccctgcagaggtctccttcgatgtcccgagtgaaccaacttcagcaacag
actcagaaccagcagcagcagcattttggtatgatgaggcagcaggggggttcgtatcca
caggtgaattttggtggctccggtgctattcaacagcagaatcagctgcaacagcaaaac
cagtcacagcagtcgcagcaacaaattggtggcggaaacttgtcgcgatctgctttgatg
gggcagagtggccacttacccatgttgtctagcgctgctgctgtggcagctgcacaattc
actctgcagccgcagatgttggcctcgccgagacaaaaaggtgggctcgtccaaggttcc
cagtttcatgcaggtaattctcctgcgcaatctttacaagggacacaagcaatggggatg
atgggatccatcaatttaggttctcaactaagagctaatgggctcgcttcttatgctcaa
cagagaatgaaccctggccaacttaggcaacaattggcccgacaaagttctctcacctct
gcacaggttcagagcttgccaagaacgtctccacttgcatttatgaaccctcagccatct
gggttgactcagaatggacagccagcgatgttgcagaattctttatcaccacagtggttg
aagcaaatgccaacaatttctggccctggctcaccttcactccgtcttcaacagcagagg
cagcaacaggttctctatcagcagcagttggcttcgcaaaagtctatgcccttgaaccag
caacagttttcccagcttgtacagcagcagcaacaactgagccatccacagcttcaacag
caacagcagctgcagcagctgcagcagcatcaacaacagcagcagcaaatacagcaacaa
tcacagcaacagcccttgaatcagcagcagcagaactccccgagaatggctgtacctgca
ggccagaaatctcttagtttaacaggatcacagcctgatgctactgcatctggtacaact
acaccaggagggagttcaagccaaggaacagaagcaactaaccaacttcttgggaagaga
aagatacaagatttagtctctcaggttgattcacagggaaggctggatcctgaagttgaa
gatcttctcttggagattgctgatgacttcattgattctgtgacaacatatgcatgcaat
ttggcaaagcatagaaaatcttcaaatttagagtccaaggatgtgttgctacacctagag
aaaaattggaatttgacaattcctggattttcaagtgaagagaggaagtaccaaaacaaa
tctttgtcaagtgatctacacaagaagcgtttagatatgatacggacgctgatggaatca
tcgcacctggaaacgaataccaataatcctaaagagatgatgagagggtttggcaatcca
gttggtgccaaccacttaagaccttcacttggtgcagaacagttggtttcacaatcaact
ggttctcaaatgctgcagcaaatgacgcgattctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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