KEGG   Prunus avium (sweet cherry): 110749370
Entry
110749370         CDS       T05161                                 
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
  KO
K12199  vacuolar protein sorting-associated protein VTA1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110749370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pavi04131]
    110749370
Membrane trafficking [BR:pavi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT associated proteins
    110749370
SSDB
Motif
Pfam: Vta1 Vta1_C
Other DBs
NCBI-GeneID: 110749370
NCBI-ProteinID: XP_021805157
UniProt: A0A6P5RRE7
Position
Unknown
AA seq 428 aa
MASDNEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQNERTKTTNSLLISLM
KQLEKDKKSLQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEIINQ
FGVLQPDLEQKQKYAAWKAADIRKALKEGKKPQAGPPAGDDDLSVPSSGMSGSYDLGPSE
AAVTSPGPQSDPSPQFYDEVKKQHSTDTLPPQFHDNAKIQRSASLQSSPKFHDEVNGQHS
SNNAPPPQSYPTAGYSSHDFHPPPPTNRPETSDYSQPYQQQPYPHEPQQHLPHNFLSHEN
NFSYPNFQSYPSFTESNIPAVTSHYPSYYQGSDPSYSAQSAPSTANHPSTAQYQSSNRNG
TVPEPAPTPTPAKTYQYDSSYQPSPEKIAEAHKAARFAVGALAFDDVSVAVDHLIKSLEL
LTNPSAGQ
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcgagcgataacgagcccgcgaagctcctcttgccgtacctccaacgtgccgatgag
ttgcagaaacacgagcctctcgtcgcttattactgtcgattgtacgcaatggagcgaggg
ctgaagatccctcagaacgagcgtaccaagaccaccaattccctccttatttccctcatg
aagcagcttgaaaaggataagaagtcactgcagttggggcctgaagataatctgtatcta
gagggatttgccttaaatgtttttgggaaggcagacaagcaagatcgtgctggtcgagca
gatttgaatactgcaaaaacattttatgctgcaagcattttctttgagattattaaccag
tttggcgtgcttcagcctgatcttgagcagaaacaaaagtatgcagcttggaaagcagca
gatataaggaaagctttgaaagaaggaaagaagcctcaagcagggccccctgctggagat
gatgatctttcagttccatcgagtgggatgagtggttcatatgatcttgggccaagtgaa
gctgcagttaccagtcctggaccacaatctgatccatcaccccagttttatgatgaagtc
aagaagcagcactctacagacactttacctcctcagttccatgataatgccaaaatccag
cgttcagctagccttcaatcctcacctaagttccatgatgaagtcaatggccagcattct
tctaacaatgcgccaccacctcagtcttaccctactgctggttactcttcccatgatttc
catccacctcctccaacaaatagaccagaaacttctgattattctcagccataccagcag
caaccctacccgcatgaaccccaacagcatttgccacataactttctttctcatgaaaat
aatttctcctatcctaatttccaatcttatccaagttttacagaaagcaatattccagca
gtcacatcccactatccctcttactatcagggctctgatccttcctactctgcccagtca
gctccttcaacagcaaaccatccttcaactgcccaataccagtcgagcaacagaaatggg
actgttccagaacctgctcctactcctactcctgcaaagacataccagtatgacagtagc
taccagccatcacctgagaaaattgccgaggcacataaggctgccagatttgcagttggg
gcgttggcatttgatgatgtgtcagttgcagtagatcacttaattaaatcgcttgaactg
ttgacgaatccatcagctggtcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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