KEGG   Prunus avium (sweet cherry): 110760526
Entry
110760526         CDS       T05161                                 
Name
(RefSeq) uncharacterized protein LOC110760526
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03020  RNA polymerase
pavi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110760526
  09124 Replication and repair
   03420 Nucleotide excision repair
    110760526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110760526
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110760526
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110760526
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110760526
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110760526
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110760526
SSDB
Motif
Pfam: SHS2_Rpb7-N Vg_Tdu
Other DBs
NCBI-GeneID: 110760526
NCBI-ProteinID: XP_021818499
UniProt: A0A6P5SQT1
Position
Unknown
AA seq 165 aa
MVGWIKQLVYFHLLCSGQHGFVVAITGVENIGKGLIHNGTGFVTFLVKYQCVVFTPFKGE
ILEAVVTMVNKKILSYLVNVNGEAEELESPVDEGGGDHEVRVKGADDDPAEGVLALGVEP
VPEVVEALLGQVKGSAVIEIGIELVDHGLVAKDAEEAHNEGEDVD
NT seq 498 nt   +upstreamnt  +downstreamnt
atggtgggatggataaagcaattggtatattttcatcttttgtgcagtggtcaacatggg
tttgtggttgcaattacaggcgtagaaaacattgggaaggggttgattcacaatgggaca
gggtttgtcacattcctcgtgaagtaccagtgtgttgttttcacaccattcaaaggggag
atcttagaagctgttgttactatggtgaacaagaaaattttgtcttaccttgtgaatgtg
aatggcgaagctgaggaattggagagtccagtagatgagggcggcggtgaccatgaggtc
agggtaaagggtgccgacgatgatccggccgagggggtactagctctcggagtcgaacca
gttccagaagtcgtagaagcccttctcggtcaagtaaagggtagtgcagtaattgaaata
gggatcgaactcgtggatcatggactcgtagcgaaggacgctgaagaggcacataatgaa
ggcgaggatgtagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system