KEGG   Prunus avium (sweet cherry): 110763856
Entry
110763856         CDS       T05161                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 21
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110763856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110763856
Spliceosome [BR:pavi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110763856
 Complex C
   U5 SnRNP specific factors
    110763856
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA DUF2608
Other DBs
NCBI-GeneID: 110763856
NCBI-ProteinID: XP_021822429
UniProt: A0A6P5T5J7
Position
Unknown
AA seq 724 aa
MKRSADSIPVAPSSSSLPPKKPVFLTKAQREQLALQRRQEETEDQKRRQSHVLSNLSHSR
PSSDAAPPTATANSDRDRDRDRDRDRDRDRDRDRDHRDRDRDRYSRDRDRERDSERRNRD
RDRDREREEETKVRERARLDKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFD
WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAVKYERELREEIRKKEGVE
EKPEEAMAQKLKEEAAELYDTFDMRVDRHWTDKKLEEMTERDWRIFREDFNISYKGSRIP
RPMRSWAESRLSEELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVL
PMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAHFLGIKVVSIVGGQSI
EEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD
AMPSSNFKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKTTD
LITQNVIMSKESEKFERLKRLLDELGDKTAIVFVNTKKNADYVAKSLDKNGYRVTTLHGG
KSQEQREISLDGFRAKKYNVLVATDVAGRGIDIPDVAYVINYDMPGNIEQYTHRIGRTGR
AGKTGVATTFLTMHDTEVFYDLKQMLIQSNSHVPPELAKHEASKFKPGSVPDRPPRRNDT
IFTH
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaaacgctcagcagatagcattcccgtagcaccctcctcctcctcgttgccgcccaaa
aaacccgttttcttgacgaaagcccaacgcgagcagttagcccttcaacgccgtcaagaa
gaaaccgaagaccagaaacgccgtcaaagtcatgttctctccaatctctcccattcccgc
ccttcctcagacgccgcaccacccacagccaccgccaattccgaccgagaccgggaccgg
gaccgagacagagacagagacagagacagagacagagaccgagatcatagggaccgagac
agggaccgatattcccgagacagagaccgggaacgagattcggagcggcgaaaccgcgac
cgcgaccgagatagggagcgggaggaggagaccaaggttcgagagcgtgcccgcttggac
aaattagcagagcgcgagcgagacaaagagctggacgccattaaagagcagtatctcgga
tcgaagaagccgaagaagcgggtcatcaagcccagcgagaagtttcggttctctttcgat
tgggagaacacggaggacacttctcgggatatgaatgctttgtatcaaaaccctcacgag
gcccaactcttgtttgggcgagggtttcgggctgggatggaccggagggagcagaagaag
ctggctgtgaagtacgagagggagctgagggaggagatccggaagaaggagggcgtggag
gagaagcccgaggaggccatggcgcagaagctcaaggaggaggctgcagaattatacgat
actttcgacatgagggtcgatcgccattggactgataagaagcttgaagagatgactgag
agggattggaggatttttcgggaggatttcaatatttcatataaagggtcgaggattccg
aggcctatgaggagttgggcagagagtagattgagtgaggagttgctcaaggctgtggag
agagctggttacaagaagccttctccaattcagatggcggcgattccacttgggctgcaa
cagcgagatgttattggcattgctgagactggttcgggtaagactgctgcctttgttctt
cctatgttgacttatatttcgaggttgcctcccattagtgaggagaatgaggccgaagga
ccttatgctgttgttatggctcctactcgtgagcttgcacagcagattgaggatgagact
gtcaagtttgcgcatttcttgggtatcaaagtggtttccattgttggtgggcagtcgatt
gaggagcaagggtttagaattaggcaaggctgtgaggttgtaattgccactccggggcgt
ttgattgattgcctggagaggcgttatgctgttcttaaccagtgcaattatgttgttctt
gatgaggctgataggatgattgatatggggtttgagccgcaggttgtaggggtcttagat
gcaatgccttccagcaatttcaaacctgagaatgaggatgaagagcttgatgagaagaag
atttacagaaccacttatatgttcagtgccacaatgccgcctgctgtagagcggcttgct
aggaagtacttgaggaatcctgttgtggtcacgattggcacggctggaaagacaactgat
ttgatcactcagaatgtgatcatgagcaaggaatctgagaagtttgagaggttaaagagg
ttgcttgatgaacttggtgataagactgctattgtgttcgttaataccaagaagaatgca
gactatgtcgctaagagtttggataagaatggatatcgtgtgaccactttgcatgggggt
aagtcacaggagcagagagaaattagccttgacggttttcgagccaagaaatacaatgtc
cttgttgcaactgatgttgcaggacgtgggattgatatacctgatgtggcctatgttatt
aattatgatatgcctgggaatattgaacagtacacgcatcgtattggacgtactggacgt
gcagggaagactggtgtggccacaacattcttgactatgcacgacaccgaagtcttttat
gatctcaagcagatgctcattcagagtaatagtcatgttcctcctgaactggcgaaacat
gaggcctcaaagttcaaacccggttcagttcctgatagaccacctaggcgtaatgacact
atttttactcattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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