KEGG   Prunus avium (sweet cherry): 110766397
Entry
110766397         CDS       T05161                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    110766397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110766397
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     110766397
SSDB
Motif
Pfam: Ku Ku_PK_bind Ku_N Ku_C VWA_CoxE
Other DBs
NCBI-GeneID: 110766397
NCBI-ProteinID: XP_021825417
UniProt: A0A6P5TE81
Position
Unknown
AA seq 686 aa
MARNKDAMVLLIDVSPSMHKALPVIEKVCSMLAEKKLIYSKYDEVAVILFGTEETENELT
KEVGGYEHVVVLQNIKVVDGQLVETLQQLPRGTRDGDFLDAIIVGMDMLIKKYGETYKGK
KRLCLLTNAQFPIKYPLEGTKEDQVSTIAEHMNTHGMRMESIVVRGSLTGEANKSVMDEN
DNLLGIFSRKTCAKLVHVESPTSLLGALRTRKISPVTIFRGDLELSPKMKIKVWVYKKTS
EEKFPTLKKYSDKAPPTDKFATHEVKVDFEYKSVEDPSKVVPPDQRIKGYRYGPQVIPIS
SAEWDAVKFKPEKSVKLLGFSDAKNIMRHYYMKDVNVFIPEPGNTRAILAVSALARAMQD
MNKVAILRCVWRQGQGNVVVGVLTPNVSDNDNIPDSFYFNVLPFAEDVREFQFPSFDNFP
ASWQPNEQQQEAADDFVRMFDLAPPGKEEALPPGLTPNPVLERFYRHLELKSRHPDAAVP
PLDETLRMITEPDKELLSQNRSVLDVFHSRFEVKENPRLKKSSRRFLRDKPSGSNEGHAD
ISDEPNSSEYTSAVKVEKVGDATPVQDFEAMINRRDSPRWVGKAIKDMKNKIHDLVEDSY
EGDNYPKALECLIALRKGCILEQEPKQFNDFLHTLCIFCEEKALSSFCEFLASKELTLIS
KTEAIDSEVTDDEARNFLVKSEPKME
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggctcgaaacaaggatgccatggttttgttgatcgatgtcagtccatcaatgcacaaa
gctcttccagtgatagaaaaagtttgctctatgctagcagagaagaagctgatttacagc
aaatatgatgaagtagcagttattttgtttggaacagaagaaactgaaaatgaactaaca
aaggaagtgggtggttatgagcatgttgtggttttacaaaatatcaaagtagttgatggg
cagcttgttgaaactctacaacaactcccacgaggaactcgtgatggtgattttcttgat
gctataattgttgggatggatatgctgataaagaaatatggagaaacatacaaaggaaag
aaacgtctttgtctgcttactaatgcacaattccctattaaatatccactagaaggaact
aaagaagatcaagtcagcaccattgctgaacacatgaatacacatggtatgagaatggaa
agtatagttgtaagaggaagtcttactggggaagcaaataaaagcgtaatggatgagaat
gataatctattgggtatattttcaaggaagacatgtgcgaagttagtgcatgttgagagt
ccgacttcattgctaggtgctcttagaactcgaaaaatatctccagttacaatattcagg
ggtgatcttgagcttagccccaaaatgaagattaaggtatgggtttacaagaaaacatcg
gaagagaagtttcccactctgaagaaatattctgataaagcgcctccaactgataaattt
gccacacatgaagtcaaagtggactttgagtacaaaagtgttgaagatcctagtaaagtt
gtacctccagatcagaggattaaaggttatcgttatggccctcaagttattcccatatca
tctgctgaatgggatgctgtcaagttcaaaccagaaaaaagtgtgaagcttctgggattt
tctgatgctaaaaacataatgcgacactattacatgaaagatgtcaatgttttcatccct
gaaccgggtaatacaagagccattcttgctgtttctgccctagcaagagctatgcaagat
atgaataaggtggcaattttgcgttgtgtttggagacaaggacaagggaatgttgttgtt
ggggtcttgacacctaatgtctctgacaatgataatattcctgattcattttacttcaat
gtgctcccttttgctgaggatgttcgagaatttcaattcccttcttttgataactttcca
gcatcatggcaaccaaatgaacaacagcaagaggctgcagatgactttgtcaggatgttt
gatcttgcaccacctggcaaagaagaggctctgccacctggcctaactccaaatcctgtt
cttgagcgcttttatcgtcatcttgagttgaaatcaaggcacccagatgcagctgtgcct
ccactcgatgaaactctcaggatgattactgaacctgataaagagttgctttctcaaaac
agatctgttcttgatgtatttcacagccgttttgaagtcaaagagaatccaaggctgaag
aaatcaagtaggcgatttttacgagacaagccatctgggtcaaatgagggtcatgctgac
atttctgatgaacctaactccagcgaatatacttctgctgttaaggttgagaaagttggg
gatgctactcctgtccaggattttgaagctatgatcaatcgtagagatagcccacggtgg
gttggcaaagcaattaaggatatgaaaaacaaaatacacgacttagtagaggactcttat
gaaggggataattatcccaaggcactggaatgcttaattgccctccgcaagggttgcatc
ctagagcaagaaccgaaacagttcaatgattttctgcacactctatgtattttctgcgag
gagaaagccctcagcagtttctgtgaatttcttgcatccaaagagctcaccttgatttca
aagacagaagctatagacagtgaagttacggatgatgaagctaggaattttctggtcaaa
tcagagccaaagatggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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