KEGG   Prunus avium (sweet cherry): 110768088
Entry
110768088         CDS       T05161                                 
Name
(RefSeq) cell division control protein 48 homolog D
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110768088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110768088
   03009 Ribosome biogenesis [BR:pavi03009]
    110768088
   04131 Membrane trafficking [BR:pavi04131]
    110768088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pavi04147]
    110768088
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110768088
Ribosome biogenesis [BR:pavi03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    110768088
Membrane trafficking [BR:pavi04131]
 SNARE
  SNARE associated proteins
   Others
    110768088
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    110768088
Exosome [BR:pavi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110768088
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N CDC48_2 AAA_16 AAA_2 AAA_5 AAA_33 AAA_22 AAA_14 TIP49 AAA_18 RNA_helicase AAA_17 AAA_28 Mg_chelatase nSTAND3 Parvo_NS1 ATPase_2 IstB_IS21 Vps4_C Zeta_toxin Viral_helicase1 AAA_7 ABC_tran AAA_24 NB-ARC NACHT TsaE DUF815 ResIII Sigma54_activ_2 UFD1 Zot
Other DBs
NCBI-GeneID: 110768088
NCBI-ProteinID: XP_021827467
UniProt: A0A6P5TJW1
Position
Unknown
AA seq 806 aa
MTDKAESSDSKGTKRDFSTAILERKKAANRLVVDDAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVVRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQI
FKSCLRKSPVSKDVEIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN
PEAMEEDVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD
NPSGAAAGSDPFATVAAGADEDDLYN
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgactgacaaggctgaatcttcagactctaagggaacgaaaagggacttcagcacggcg
atccttgagcgcaagaaggctgcgaatcggcttgttgtggatgatgctatcaacgatgac
aactcggtcgtcgcgctccatccagataccatggagaagcttcagctctttcgtggtgac
acaatcttgatcaagggaaagaaaaggaaggatacaatctgcattgcccttgctgatgat
acatgtgaggaaccaaagataaggatgaacaaggttgtcaggagcaacctaagggttagg
ctgggggatgttgtttctgttcaccaatgtgctgatgtcaagtatggaaagcgtgtccac
attcttcctgtggatgacactattgaaggggtcactggaaatctgtttgatgcatacttg
aaaccttatttcctggaggcctaccgtccagtgaggaagggtgatctcttccttgtacga
ggaggaatgaggagtgtagagtttaaggttattgaaactgaccctcctgagtactgtgtg
gttgctcccgacactgaaatcttctgtgagggggagcctgtgaaaagggaggatgaggag
agattaaacgaggttggctatgatgatgttggtggagttaggaaacagatggctcagatt
cgtgaattagtggagctgccattgaggcatcctcaactatttaaatcaatcggtgtgaag
ccaccaaagggtattctgctgtatggacctcctggatcaggtaagactctaattgcccga
gctgtggctaatgaaactggggcattctttttctgcatcaatggacctgaaatcatgtca
aaattggctggggagagtgaaagcaatctcaggaaagcttttgaggaagcagagaagaat
gcaccatcaattatctttattgatgaaattgattcaattgctcccaagagagagaagaca
catggagaagttgagaggaggattgtttcccagctcttgacgctcatggatggactaaag
tctcgtgcacatgtaattgttatgggggctacaaatcgaccaaacagtattgatccagct
ctcagaaggtttggaagatttgatagggaaatagatattggtgtaccagatgaagttggg
cgtctcgaggttgtccgtattcatacaaagaacatgaagcttgctgaagatgttgatttg
gaaaagatagctaaggacacacatggttatgttggtgctgatctggctgctttgtgtact
gaggctgctcttcaatgcatcagagagaagatggatgtgattgacttagaagatgaggaa
atagatgctgagattctgaattcaatggcagttacaaatgagcacttcaagactgctctt
ggcacaagcaacccatctgctcttcgtgaaacagtagttgaagtgcccaatgttagctgg
gaagatattggaggtcttgagaatgttaagcgagaacttcaagagactgttcagtatcct
gttgagcatcctgagaaatttgagaaatttggaatgtcgccttcaaagggagttcttttc
tatggtcctcctggatgtggtaaaactcttctcgccaaagctattgccaatgagtgtcaa
gcaaacttcatcagtgtcaagggacctgaattgctaacgatgtggtttggagagagtgag
gccaatgtgagggaaattttcgacaaggcccgtgggtctgctccatgtgtcctgttcttt
gatgaacttgattccattgctacacagagaggtagtagcgtaggtgatgctgggggtgca
gctgacagggttttgaaccaactccttacagaaatggacggaatgactgctaagaaaact
gttttcattattggggctaccaacagacctgacattatagaccctgcacttctacgtcca
ggacgtctggatcagttaatttacatccctctccctgatgaggaatctcgctttcaaata
ttcaaatcttgcttgaggaaatctccagtttccaaagatgtggagatcagagcccttgcc
aagtacacccaaggattcagtggtgctgatataactgaaatatgccagcgtgcttgcaaa
tatgccattagagagaatattgagaaggatatcgagagggagaggaggagaagcgaaaat
cctgaggctatggaggaggatgttgatgacgaagtagcagagatcagggcagctcatttt
gaggagtcgatgaagtatgctcgtaggagtgttagtgacgctgatatccgcaaataccag
gcatttgcgcagacattgcagcagtcaagagggtttggaaccgagttcaggttcgcagac
aatccttctggcgcagccgctggatctgacccttttgcaactgttgctgctggggctgat
gaagatgacctgtacaactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (35)   
   Pfam (35)   
All databases (51)   

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