KEGG   Prunus avium (sweet cherry): 110769443
Entry
110769443         CDS       T05161                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110769443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110769443
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     110769443
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 110769443
NCBI-ProteinID: XP_021829109
UniProt: A0A6P5TQ67
Position
Unknown
AA seq 382 aa
MSHSKTSQGDGPNNAGKRNLPSWMSARDNESESIGKKPTRAGECEESDEGAKPRLAKGRG
GASSSGTTKFSKLMEGVVFVLSGFVNPARSILRSQALEMGAEYQPDWNSDCTLLVCAFPN
TPKFRQVEADCGTIVSKDWISECYTQKKLVDIESYLMNAGKPWRKSSVSHDNSQDKKASQ
PRKSKKQDGDSPSKPTASSTPKQIKASNSVKECFSPSKVKKWAVDDLNKTISWLESQEEK
PEPDEINQIAAEGILTCLQDAIDSLEQKQDVRQVTEQWNFIPRVVEELAKLEGTRNESAA
VSKEDLCRQVMECKRIYEVELNNLGDDPSKKKKPKTERQERDSGRTEAISSGTAGYDSDE
TIEMTEEEIDLAYKNAVASKIP
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgtctcattcgaaaacaagccagggtgatggtcccaataatgctgggaagcgaaacctt
ccttcatggatgagtgcaagagacaatgagagtgagtctattggaaagaaaccaactcgg
gctggtgaatgtgaggagagtgacgagggtgcaaagcccaggctagccaaagggcgtgga
ggtgcatccagttcgggaaccacaaaattttccaaacttatggaaggagtagtgtttgta
ctgtctgggtttgttaatcctgcgcgcagcattctgcggtcacaggccttggaaatgggg
gcagaatatcagcctgactggaactcagattgcactctcttggtttgtgcatttccaaac
accccaaagtttcgacaagttgaggcagattgtggaactatagtttcaaaggattggata
tcagagtgttacacgcagaagaagcttgttgatattgaaagttaccttatgaatgctgga
aaaccctggcgtaaaagcagtgtttcccatgacaacagccaagacaaaaaagcatcccaa
cctagaaaatcgaagaagcaagatggagattcaccatcaaaaccaactgcgtcatcaact
ccaaagcagattaaagcttctaattctgttaaggagtgcttttctccgtctaaagtgaag
aagtgggcagttgacgatttgaataagacaatttcatggctggagagtcaagaagaaaag
ccagagccagatgagataaaccaaatagcagctgaagggattttaacttgtttacaagat
gcaatagattctcttgaacaaaagcaggatgtccggcaagtaactgagcagtggaatttc
attcctcgtgtagtcgaagagttggcaaagctcgagggcacgagaaatgagtctgcggca
gtatccaaggaagatctttgcagacaggtaatggagtgtaaacgaatttacgaggtggaa
cttaataatttgggtgatgacccctcaaagaagaagaagccaaagactgaaagacaagag
agggacagtgggagaactgaagccatatccagtggtacagcaggatacgacagtgatgaa
acaattgagatgacagaagaggaaatagaccttgcatataagaatgctgttgcttctaag
atcccctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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