KEGG   Prunus avium (sweet cherry): 110770997Help
Entry
110770997         CDS       T05161                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
pavi04141  Protein processing in endoplasmic reticulum
pavi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110770997
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110770997
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110770997
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pavi01009]
    110770997
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110770997
   03009 Ribosome biogenesis [BR:pavi03009]
    110770997
   03110 Chaperones and folding catalysts [BR:pavi03110]
    110770997
   04131 Membrane trafficking [BR:pavi04131]
    110770997
   03051 Proteasome [BR:pavi03051]
    110770997
   03029 Mitochondrial biogenesis [BR:pavi03029]
    110770997
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pavi04147]
    110770997
Protein phosphatases and associated proteins [BR:pavi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     110770997
Spliceosome [BR:pavi03041]
 Complex B
  Other components
   Prp19 complex
    110770997
 Complex C
   Prp19-CDC5 complex
    110770997
Ribosome biogenesis [BR:pavi03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    110770997
Chaperones and folding catalysts [BR:pavi03110]
 Heat shock proteins
  HSP70 / DNAK
   110770997
Membrane trafficking [BR:pavi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    110770997
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    110770997
Proteasome [BR:pavi03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    110770997
Mitochondrial biogenesis [BR:pavi03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    110770997
Exosome [BR:pavi04147]
 Exosomal proteins
  Proteins found in most exosomes
   110770997
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C
Motif
Other DBs
NCBI-GeneID: 110770997
NCBI-ProteinID: XP_021830910
Position
Unknown
AA seq 410 aa AA seqDB search
MIVVNHKGEEKQFAAEDISSMVLAKMREIANSYLCSRIPVKDAVITVPSYFNDSQRQATI
QAGKLAGLNVLRIINEPTAAAIAYGIDKKASWFRKRNVMIFDWGGGTLDVSLLTIGHNVF
DVKATAGDTHLGGEDLDNRMVNYCIQEFERKHKVGIGGNVKALRKAKIECEKAKKVLSFS
FEAVIEIDSWFKGEDFHTTFTRDMFEKLNMDIFNKCMEPVKKCLEDAKIDISDVDDVVLV
GGSSRIPKVQELLQEVFNGKELCKSINPDEAVAYGAAVQAAVLSGNVTGKLQHFTLSDVI
PMSLGTEVRKENLMNVMIPRNTKIPTKKHRTFVTRYDNQTSVRCGVFEGENKFTRDNNYL
GGFTIDGIPRAPKGVGEVDVCFSIDANGILKVSAEVMSTGKKKAITINRS
NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt
atgattgtggttaaccacaagggtgaagagaaacaatttgctgctgaagacatctcatcc
atggttttggcaaagatgcgggagattgccaactcctacctttgctcaaggattccagta
aaagatgcagttatcactgtcccctcttacttcaacgactctcagcgccaggcaacaata
caagctggtaaattagccggcttaaatgtgctgcgtattatcaacgaaccaactgctgca
gccatcgcttatggcatcgacaagaaggccagttggtttcgtaagagaaatgtgatgata
tttgattggggcggcggtactttggatgtgtcactacttaccataggccataatgtcttt
gacgtgaaggccactgccggagacactcaccttggcggtgaagacttggataacagaatg
gtgaattactgcatccaagaattcgagagaaaacataaggtgggcattggtggaaacgtc
aaagctcttcggaaggccaaaattgagtgtgagaaagcaaagaaggtactttcattttcg
tttgaggctgttattgaaattgactcttggtttaagggtgaagattttcatacaactttc
acccgcgacatgtttgaaaaactgaacatggatatcttcaataagtgcatggagcctgtg
aaaaagtgtttggaggatgccaaaatcgacatcagcgacgtcgatgatgttgttcttgtt
ggtgggtcttctagaatccccaaggtgcaagagctactgcaggaggttttcaacggtaag
gaattgtgcaagagcattaatcccgatgaggctgtcgcttatggagccgctgttcaagct
gcagtcttgagtgggaacgtgacggggaagcttcaacacttcacactctcagatgtgatc
cctatgtcacttgggacggaagttcgtaaagaaaacctcatgaatgttatgatccccaga
aataccaaaattcccaccaagaagcacagaactttcgttacccgctatgacaaccaaacg
tccgtccgttgtggagttttcgagggagagaataagttcaccagagataataattatttg
ggtggatttaccatagatggcattccccgagctccaaagggagttggtgaagtagatgtt
tgcttttctatcgatgcaaatggaattctgaaagtttccgctgaggtcatgtccaccggc
aaaaagaaagcaattacaatcaacaggtcatag

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