KEGG   Pseudomonas avellanae: BKM03_09810
Entry
BKM03_09810       CDS       T05369                                 
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pavl  Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pavl03009]
    BKM03_09810
Enzymes [BR:pavl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     BKM03_09810
Ribosome biogenesis [BR:pavl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BKM03_09810
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AVB19513
Position
1960099..1961055
AA seq 318 aa
MTNIAPPTPGVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRIPPVRVPERDEPVPVAQALLQRLEAAIVYEDKALIVLNKPAGIAVHGGSG
LSFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMA
LVRGNWATAQKQVRAPLLKSNLRSGERMVEVNEEGKEALTLFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHAIAGDTKYGDESFSREIRDLGGKRLFLHAYMLTVPMPDGSKLNV
QAPVDEMWAKTVERLSAT
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacgaatattgcccctccaacccccggcgttcagctggttgaggttgcgccggaactt
gccggtcaacgcatcgataattttctgatcacttatctcaagggtgtgcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgtgtgaacaagggccggatcaagcccgaa
tataagttgcaggcaggcgatatcgtgcgcattccccctgtgcgcgtacctgagcgcgac
gagcctgtgccggttgcgcaggccctgttgcagcgcctcgaggcggcgattgtctacgaa
gacaaggcgctgatcgtgctcaacaagcctgcgggcattgccgtgcacggtggcagcggc
ctcagtttcggcgtgatcgaagccttccgccagctgcgcccggacgccaaggagcttgag
ctggtgcatcgcctcgatcgcgacacctcgggcctgctgatgattgccaagaagcgcagc
atgctgcgtcacctgcatgaagccctgcgtggcgacggcgtcgacaaacgctacatggca
ctggttcgcggcaactgggccacggcgcaaaagcaggtgcgcgcgccattgctcaagagc
aacctgcgctccggcgagcggatggtcgaagtcaacgaggaaggcaaggaggcgctgacg
ctcttcaaggtgctgcgtcgtttcggcgacttcgccacgatggtcgaggccaagccggtg
accgggcgtactcaccagatccgcgtgcacacgctgcacgccggtcatgccatcgcgggc
gacaccaagtacggtgacgagagtttcagtcgcgagattcgcgatctgggcggcaagcgc
ctgtttctgcatgcctatatgctgaccgtgccgatgcctgatggcagcaaattgaatgtg
caagcacccgtcgacgagatgtgggcaaagacagtggagcgtctgagtgcaacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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