KEGG T05369: BKM03

Pseudomonas avellanae: BKM03_17420

Entry

BKM03_17420       CDS       T05369

Name

(GenBank) phenylalanine--tRNA ligase subunit beta

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

pavl Pseudomonas avellanae

Pathway

pavl00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:pavl00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    BKM03_17420
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pavl01007]
    BKM03_17420
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pavl03016]
    BKM03_17420
Enzymes [BR:pavl01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     BKM03_17420
Amino acid related enzymes [BR:pavl01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   BKM03_17420
Transfer RNA biogenesis [BR:pavl03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    BKM03_17420
Prokaryotic type
    BKM03_17420

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB tRNA_bind B5

Other DBs

NCBI-ProteinID:

AVB20794

Position

complement(3630394..3632772)

AA seq 792 aa
MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGVVVGEVLSTEQHPDAD
KLRVCQVSNGSETFQVVCGAPNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCS
AAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREVGA
LYAAEVTRPQIAAVSAVHDEVRPVEVLAPTACPRYLGRVIRNVDLSRPTPLWMVERLRRS
DVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRADT
LVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHTDASHRYE
RGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVEQMLGLVI
ENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ
ARLAPQANAEAKGDLPELRRLLVARGYQEAITYSFIDPKWFELFSPGVKPLLLANPISND
MAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLKQEPMLAGVVCGSRLPE
GWAQGRDAVDFFDVKADVEAVLGFAGALGEFTFTPGQHPALHPGQTARILRDGREVGFLG
AIHPELSKNLGLDRPVFVFELVLAEVATGRLPKFHELSRFPEVRRDLALLADRDVSASAV
LDVIRENAGEWLTDLRLFDVYQGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNATTLAILT
SLEERLNATLRK

NT seq 2379 nt +upstreamnt +downstreamnt
atgaaattcagtgaacaatggctgcgcggctgggtaagcccgcaggtttcccgcgacgag
ctggttgctcgtctgtcgatggccggtcttgaggttgacagcgtgacgctggccgccggc
gttttcaccggagtcgtggtgggcgaggtgctgagcaccgagcaacaccctgatgccgac
aagcttcgtgtgtgccaggtcagcaatggcagcgaaacctttcaggtcgtctgcggtgcg
ccaaacgtgcgcccgggcctgaaaattccgttcgccatgatcggtgccgagctgccgggc
gacttcaagatcaagaaggccaagctgcgcggcgtcgagtccaacggcatgctgtgttcc
gctgccgaattgcaggccggtgaaggcaatgatggcctgatggagctggcggctgatgcg
ccggtcggccaagacattcgtgtctacttgggcctggacgacgccagcatcgaggtcgac
ctgaccccgaaccgtggcgattgcctgtcagtggccggtctggcacgtgaagtcggcgcg
ctttacgccgccgaagtcacccgcccgcaaatcgctgctgtcagcgctgtacatgatgaa
gtgcgtccggttgaagtgcttgcaccaactgcctgcccacgctacctcggccgcgttatc
cgcaatgtcgacctgtcgcgtcctaccccgctgtggatggttgagcgtctgcgtcgttcc
gatgtgcgcagcatcgatgctgctgtcgacatcaccaactacgtgatgctcgagttgggt
cagcctctgcatgcgttcgatctggctgaaatcaacggcgggatccgcgtacgcatggcc
gaggagggcgagaagctcgttctgctcgacggccaggaagtcagcctgcgtgccgacact
ctggtcatcgccgaccaccagcgcgcactggccatcgccggcgtgatgggcggcgagcac
agcggcgtaacggccggtactcgcgacatcttccttgaaagcgcgttcttcgacaccatt
tctgtggcgggcaaggcgcgctcctacggcctgcacaccgatgcctcgcatcgctatgaa
cgtggtgttgactggcaactggcccgtgaagcgatggagcgggccactggcctgctgctg
gaaatcaccgggggcgaagccggtcctgtgatcgaagtggtcagcgaacaacacctgccg
tcgattgcgccggtcacgctgcgtgccagccgtgtcgagcaaatgctcggtctggtcatc
gagaacgccgagatagagcgtctgctgaccggtcttggcctgacagtgtccgccgaagct
gacggccagtggcgtgtagacgtgccaagtcatcgtttcgacatcagccttgaagtcgat
ctgatcgaagaactggcacgtctttacggctacaaccgcctgccggttcgttacccgcaa
gcccgtttggccccgcaagccaacgccgaagccaaaggcgatctgcccgagctgcgtcgt
ctgctggttgcgcgtggttatcaggaagcgattacctacagcttcatcgaccccaagtgg
ttcgagctgttttcaccgggtgtcaagccactgttgctggccaacccgatctccaacgac
atggccgccatgcgcgcctcgttgtggccgggtctggtcaaagcgctgcagcacaacctc
aaccgccagcaagaccgcgtccgcatgttcgaaagcggcctgcgcttcgtcggtcagctt
gacggcttgaagcaagaaccgatgctggccggtgtggtatgtggcagccgcctgccggaa
ggttgggcgcaaggtcgcgatgcggtcgatttcttcgacgtcaaagccgatgtcgaagcg
gttctgggttttgccggtgcgttgggtgagttcaccttcacgccgggtcagcacccggct
ttgcaccctggccagactgcgcgcattttgcgcgacggtcgtgaagtcggcttcctgggt
gccatccatccggagttgtcaaaaaacctgggtctggatcgtccggtgtttgttttcgag
ctggtgctggccgaagttgctacaggccgtttaccgaaattccacgagttgtcgcgcttc
cctgaggtgcgccgcgacctggcgctgctggctgatcgcgacgtttccgccagtgcggtg
ctggacgtaattcgtgaaaatgcaggcgagtggctcacagacctcaggttatttgatgtt
taccagggtaaaggcattgatccacatagaaaaagccttgcagtcggcttgacctggcag
catccatcgcgcactcttaatgacgatgaggtaaacgcaacgacacttgctatcctcacc
tcgctggaggagaggttaaacgccacgttaaggaagtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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