KEGG   Pseudomonas avellanae: BKM03_28780
Entry
BKM03_28780       CDS       T05369                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pavl  Pseudomonas avellanae
Pathway
pavl02025  Biofilm formation - Pseudomonas aeruginosa
pavl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM03_28780
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    BKM03_28780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pavl02044]
    BKM03_28780
Secretion system [BR:pavl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM03_28780
SSDB
Motif
Pfam: T6SS_HCP DUF3707
Other DBs
NCBI-ProteinID: AVB22774
UniProt: A0A6H3CSD4
Position
6003740..6004258
AA seq 172 aa
MAFDAYIQIDGIPGEVLDDKHKDWIEVLGYEFGATQATSATASSSGGASSERVALSDFSI
RKSVDKASAKLFEACCKGTHIAKIQLNVNRAGGDKLTYLTINLEEVVVSSVKAVAGGNQK
GEDNAVSDLPIEEISFNFARIKTTYTQQSRSDGQGGGNVTGGWDRTANKVFA
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcatttgacgcatacatccaaatcgacggcatcccgggcgaagttctggacgacaag
cacaaagactggatcgaagtgctcggttacgagttcggcgctacccaggccacctccgct
accgccagctcgtcgggcggtgcttcgtccgagcgcgttgcactgagcgacttcagcatc
cgcaaatcggtggacaaggcttctgccaagctgttcgaagcgtgctgcaaaggcactcac
atcgccaagatccagctgaacgtcaaccgtgcaggcggcgacaagctgacctacctgacc
atcaacctggaagaagtggttgtttcttccgtgaaggctgttgcaggcgggaaccagaaa
ggcgaagacaacgcagtcagcgatctgccgattgaagaaatcagcttcaacttcgctcgc
atcaagaccacctacacccaacagagccgttccgatggccagggtggcggtaacgtcacc
ggcggctgggaccgcactgcgaacaaagtattcgcataa

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