KEGG   Pseudomonas avellanae: BKM03_28820
Entry
BKM03_28820       CDS       T05369                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pavl  Pseudomonas avellanae
Pathway
pavl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM03_28820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pavl02044]
    BKM03_28820
Secretion system [BR:pavl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM03_28820
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Sarcoglycan_1 DUF3540
Other DBs
NCBI-ProteinID: AVB22782
UniProt: A0A6H3CWU5
Position
6011657..6014533
AA seq 958 aa
MNSILDAAMNAFSGPLSQAGRLLELKTPQGQELFALRAHAVERLSHVARYTVDVINQTNS
FDPEKLIGQAVQLSIRLDDGSLSPRHGWVESVRYLGSDGGLEDWQLVFAPWFSLLEYRID
CRIWQEMSLPDILAQVFQRYSQAQANYRFDLQRDYPLLSYVTQFNETDANFVQRWCEQEG
LFWYVEHKDDSHCIVFTDNIMSLPTLTPEKLRFHTQQAADLTDSITQWSPGARLLNGLVQ
WSSSEYRSHAQPQVTHSMALPAASAPPDLERYQYRGQYAWQNLSRGEWLARVQIEQDESA
ARRIQGQGGVRQMQPGHGFELTQHPLYELKTLKDRQFLIVAVEFFVQSNLPIGKTRPSPP
GSLKTLLDTLQAQSSLPVGDEGFYLNRFETQRLDIPYRSAFTHQKPAHPGPQTAVVVTPT
GHEVFTDNLNRVCVRFHWDRLMKDGELGSCWLRMMQSSSGQDWGSVNVPRAGEEVVVTFL
DNDIDRPLIMGQVYGGHKPAWHSSGLMSGYKSQEIQGSGYNQWVMDDSTGQVRTQIHSSH
GHSQLNLGYLIDQQGNSRGALRGAGFELRTDAYGALRAQQGLYLSTWPRNKALGGQIDTQ
EAQQHLSNAQARVKAMSDVAEQHNALPMPGGITSIEQLNADTQANYGSGGESQVSSGPQQ
RNGGDTKAAIMSGGRGQTSGYKKPLLVASSPADIVTVTPQNTHIHSGKQLTLSTGEDTNL
ASGKSLLVSVAQSISLFAQAAGAKLFAAKGKIEIQAQDDSIELTAKESVRITSTARTIEI
AAQEEILLTSGAAYIRIKGGNIEIHAPGTIDVKGVKKTFNGPAQLNRDNPAWPTDAIKQK
LTAYAGLSSAAGYATWTGQPYTILGDGAEVKKGVMDATGQIAIDHHVTTSQYKIDLSNGV
SYDLPVAGDYKGDAKNAELANRGLHRHENASHPDVKPRDNRSLFRNAYDQLSNPESDG
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgaactcgatactcgacgccgccatgaacgctttcagcgggccgctcagtcaggccggt
cgcctgctggaattgaagacgccacaaggtcaggaactgtttgcgctgcgcgcacatgcc
gtggagcgtctgagccacgtggcccgctacacggtcgatgtgatcaatcagaccaacagc
tttgatccggagaaactgattggtcaggcggtgcaactgagcatccgcctcgacgacggc
agcctgagccctcggcatggctgggtcgagagtgtgcgttatctcgggagcgatggcggg
cttgaggactggcaactggtcttcgcgccgtggttcagcctgctggaataccgtattgat
tgccggatctggcaggagatgagcttgccggacatccttgctcaggtgtttcaacgctac
agccaggcccaggccaactaccgcttcgacctgcaacgcgattacccgctgctgtcctac
gtgacgcagttcaacgagactgacgccaacttcgtacagcgttggtgcgagcaggaaggc
cttttctggtacgtggaacacaaggacgacagtcattgcatcgtgttcaccgacaacatc
atgtcgctgcccaccctgactcccgagaagctgcgttttcacactcagcaagccgccgac
ctgaccgacagcatcacccagtggagccccggtgcgcgcctgctcaatggcctggtgcaa
tggagcagcagcgaataccgcagtcatgcgcagccgcaggttacccactcaatggcattg
cctgctgcatcggcgccgccagaccttgaacgttatcaataccgtggccagtacgcatgg
cagaacctcagccggggcgaatggctcgcccgggtgcagatcgaacaggatgagtcggca
gctcgtcgtattcagggccagggcggtgtgcggcagatgcagccgggccatgggtttgaa
ctgacccaacacccgctttacgagctcaagacgctcaaggaccgtcagtttctgatcgtc
gccgtggagttttttgtgcagagcaacctgccgatcggcaagacgcgaccaagcccgcct
ggcagtctgaaaacattgctggacacactgcaggctcaatcttcgctaccggttggcgat
gaaggcttctacctgaatcgctttgaaacacagcgtctggatatcccctatcgcagcgcg
ttcacccaccagaaaccggcccatcccggcccgcagacggccgttgtcgtgacacccaca
gggcatgaggttttcactgacaacctgaaccgggtttgcgtgcgctttcattgggatcgt
ctgatgaaagacggcgagctgggctcgtgctggctgcgcatgatgcagtcgagcagcggc
caggactggggcagcgtcaacgtgccgcgcgcaggcgaagaagtcgtcgttacctttctt
gataacgatatcgaccggccgctgatcatggggcaggtctacggcgggcataagcctgcg
tggcactccagtggtttgatgagtggttataaaagtcaggagattcaggggagcggttat
aaccagtgggtgatggacgattccaccggccaggtcaggacccagatccacagcagtcat
gggcacagccagctaaaccttggttacctgattgatcagcagggcaattcgcgaggtgcg
ctgcgcggtgccgggtttgaactgcgcactgacgcctacggcgccttgcgtgctcagcag
ggcctgtacttgagcacatggccgcgcaacaaagcgctgggcgggcagatcgacacgcag
gaagctcagcagcatctgagcaacgctcaggcgcgggtcaaggcaatgtcggatgttgcc
gagcagcacaacgcgctgccgatgccgggcggtatcacaagcatcgagcagctcaacgcc
gatacgcaggccaattacggcagcggcggcgaaagccaggtaagcagtggcccacagcag
cgtaatggcggtgacaccaaggcggcgatcatgagcggcggccggggccagacgtcgggc
tacaaaaagcccttgctggtcgcctcctcgcccgccgacatagtgaccgtcacgccacaa
aatacccacattcacagcggcaagcagttgaccctctcgaccggcgaggacaccaacctg
gccagcggcaagtcactgttggtgagtgtcgcgcaaagcatcagcctgttcgcccaggcg
gcaggcgccaagctgtttgcagcaaagggcaagattgaaatacaggcacaggacgacagc
attgaactgaccgcaaaggaaagcgtgcgcatcacctcgacggcccgcaccatcgagatc
gccgcacaggaagagatccttttgaccagcggcgcggcttacatccgcatcaagggcggc
aatatcgaaattcatgctcccggaaccatcgatgtaaaaggcgtgaaaaagaccttcaac
ggcccggcgcaactcaaccgggataacccggcgtggccaaccgacgcgatcaaacagaag
cttacggcctatgcagggcttagtagcgcggcgggctatgcaacgtggacaggtcagccg
tacaccattctcggcgacggcgccgaagtcaaaaaaggcgtgatggacgccacgggacag
atcgccatcgaccatcacgtcaccaccagccagtacaagattgacctgagtaacggcgta
agttacgacctgcccgtggcgggcgattacaaaggcgacgccaaaaatgcagagctggcc
aaccgcgggcttcaccgccacgaaaacgcgtcgcaccccgacgtaaaaccgcgcgacaat
cgcagcctgttccgtaatgcctatgatcagttgagtaatccggagtcggatgggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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