KEGG   Photorhabdus asymbiotica: PAU_01213
Entry
PAU_01213         CDS       T00941                                 
Symbol
recJ
Name
(GenBank) ssdna exonuclease, 5'--> 3' specific (ssdna exonuclease recj)
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pay  Photorhabdus asymbiotica
Pathway
pay03410  Base excision repair
pay03430  Mismatch repair
pay03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PAU_01213 (recJ)
   03430 Mismatch repair
    PAU_01213 (recJ)
   03440 Homologous recombination
    PAU_01213 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pay03400]
    PAU_01213 (recJ)
DNA repair and recombination proteins [BR:pay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     PAU_01213 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     PAU_01213 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      PAU_01213 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: CAQ83305
UniProt: B6VKD0
Position
1387029..1388762
AA seq 577 aa
MNIETRLRRRPAVDDSHLPQQIHPLLRRLYAIRGIQQANELERSVQGLLNYQHLSGVQQA
VSLLLAALHEHWRIVIVGDFDADGATSTALAIRSLRAMGYRNLDYLVPNRFEDGYGLSPQ
VVEEVVKKGADLIITVDNGISSHDGVAAAHQHQMKVIVTDHHLPGEILPAADAIINPNLS
DCSFPSKSLAGVGVTFYLMSALRAALRKEQWFEKQGVALPNLAEMLDLVALGTVADVVPL
DTNNRILVYQGLNRIRAGRCCAGIRALLEVSKRDAHKLTASDLGFFLGPRLNAAGRLDDM
SIGVALLLTDDIAKARQIACELDGLNHTRREIEQGMQQEALQICDKLERTSTELPYGLAL
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSVQGLHMRDALERLDTLNP
GLILKFGGHAMAAGLSLEQDKFEQFQHHFSVLMADWLDISQLEGVIWSDGELAIGELTLE
MAEMLRDGGPWGQAFPEPVFDGKFKLHQQRIVGERHLKVIVEPLNGGPMLDGIVFNIDPT
RWPDNSVRAVELAYKLDVNEFRGNRDVQLLIQHLWPY
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaatattgaaacacgactccgccgccgtccggcggtggatgatagtcaccttccacaa
caaatccatccgttactgcgccgtttatatgccattcgaggtatccagcaagctaatgaa
ttggagcgaagtgtgcaaggattgctcaattatcagcatctgagtggtgtacaacaggcg
gtatcgctattactggcagcattgcatgaacactggcgtatcgttattgtcggcgatttt
gatgctgacggtgcaaccagtacggcactggctatccgatcattacgcgcgatgggatat
cgtaatctggattatctggtgccaaatcgttttgaagatggttatggcttaagcccacag
gtggtagaggaggtcgtcaaaaaaggcgccgatcttattattaccgtggataatggtatc
tcttctcatgatggggttgcggcggctcatcagcaccagatgaaggtgattgtcacagat
catcacttgccgggtgagattctgccagccgctgatgccattattaaccccaatctgtct
gattgttcgtttccgtctaaatcattagcgggagttggcgtcacattttatttgatgtct
gctttgagagcggctctgagaaaagagcaatggtttgaaaagcagggtgttgctctgccg
aatttagccgaaatgctggatttggttgcgctgggaactgtcgccgatgttgtgcctttg
gataccaataaccggattttggtttatcaggggctaaatcgcattcgtgccggacgttgt
tgcgcggggattcgtgcattactggaagtttccaaacgtgatgctcataaactgaccgcc
agcgatttgggtttttttcttggaccaaggttgaatgccgcaggtcgtctggatgacatg
tctattggcgtcgctttattgctaactgatgatatagcaaaagcgcgtcagatagcttgc
gaattggatggactgaatcatacccgtcgtgaaatagaacagggaatgcagcaagaagca
ctgcaaatctgtgacaaactcgaacgtactagcactgaattgccttatggactggcgctc
tatcatcccgaatggcatcagggggtagtgggcattctggcatcccgtattaaagaacgt
tttcaccggcctgttatcgcttttgcgccggcgggtgatggtactttgaaaggttctggc
cgttcagttcaggggctgcatatgcgtgatgcccttgaacgattggatactttaaatcca
gggttgatacttaagtttggtggtcatgcaatggctgccggcctgtcacttgaacaggat
aaatttgaacaattccagcatcatttttctgttctgatggcagattggttggatatttcg
caacttgaaggtgttatctggagtgatggtgaattggcgattggtgaactgacattagaa
atggctgaaatgttgcgtgatggtggcccttgggggcaagccttcccggaacctgttttt
gacggtaaattcaagttacatcaacagcgtattgttggagaacgtcatttaaaagtgatt
gtagagccattaaatggtggaccaatgttagatggtatcgtattcaatatcgatccaact
cgctggccggataacagtgtccgtgcagtggaacttgcttataaactggatgttaatgag
tttagaggcaatcgtgatgtgcaacttttgattcagcatctttggccttattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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