KEGG   Pseudomonas azotoformans: AYR47_14850
Entry
AYR47_14850       CDS       T04879                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pazo  Pseudomonas azotoformans
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pazo03016]
    AYR47_14850
Enzymes [BR:pazo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AYR47_14850
Transfer RNA biogenesis [BR:pazo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AYR47_14850
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AMN79526
UniProt: A0A127HYD3
Position
3187430..3188563
AA seq 377 aa
MAIDIHWICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPL
TIDNWQPLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY
SRLVQAVLDIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVYTRLRPQLSDDKYAWV
LEDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRII
REHSLWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAGSVPMDQWPPAVAEPL
PVDAAALIKQLRALGQAEAERLEMAPELMLRKKTLEALVKSGYPDGPYKLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtggccatcgatattcactggatctgcgacaacgatagcctcggccagcattgcgccgaa
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgacaccttttat
cccattgccgggctgatccagattggtgatggcgtacgcgcttacctgatcgatcccctg
accatcgacaactggcaacccttggccgccttgctggagaacccggcggtgatcaaggtg
gtgcatgcctgcagcgaagacctcgaagtgttgctgcggttgaccggcagcctgccagtg
ccgttgttcgacacccaattggccgccgcttacctgaatcttggtttctccatgggctac
tcgcgcctggtgcaagccgtgctggatatcgagttgcccaagggcgagacccgttccgac
tggctgcagcggcccttgtccgagacgcaggtcagctacgccgccgaagacgcggtgcac
ttggccgaggtttacacccgcctgcgtccccaactgtcggacgacaagtacgcctgggtg
ctggaagacggcgcggagttggtcgccaacctgcgccgcgaagtcgacccttacgaggtg
tatcgcgacgccaagctggcctggaagctgtcccgcgcccaactggctgtactgcgtgag
ctgtgcgcctggcgcgagcagcaggcgcgcgcccgtgacctgccgcgtaaccgcatcatt
cgcgaacactcgttgtggcccctggccaaatcccagccggataacctcgccgccctgggc
aagatcgaagacatgcacccgcgcaccgtgcgtcaggacggccagttcctgctggacctg
atcaaacgtgccggcagcgtgccgatggaccaatggccacccgccgttgccgaaccgttg
ccggtggacgccgccgcactgatcaagcaactgcgtgcccttggccaagctgaagccgaa
cgcctggagatggcgccggaactgatgctgcgcaagaaaaccctcgaagccctggtcaaa
agtggctaccccgatgggccttataaattgccagactcgctgcgtggctggcgccgcgag
ttgatgggccaggcgctgctcgacagcctggccaccgccggagaacagccttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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