KEGG   Pseudomonas azotoformans: AYR47_18160
Entry
AYR47_18160       CDS       T04879                                 
Name
(GenBank) type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
pazo  Pseudomonas azotoformans
Pathway
pazo02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AYR47_18160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pazo02044]
    AYR47_18160
Secretion system [BR:pazo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AYR47_18160
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AMN82690
UniProt: A0A140GWJ6
Position
complement(3873938..3875410)
AA seq 490 aa
MESAAAQVLVTDEQPSLLDQLLANTTIRPSQEGYAIARQGVAAFISEILQSGDHQQPVNK
HRVDQMIAEIDHALSKQMDVILHQPQFQQLESAWRGLKLLVDRTDFRENIKLEVLHVTKE
ELLDDFDNAGDITRSGLYKHAYTSGYGQFGGEPIAAMIGNYTFGPSSPDMKLLSYIASVG
AMAHAPFVMAAGPEFFNLKSYQDLPSVKEVSDIFEGPGHTKWRSLREMEDSKYIAATLPR
FLLRSPYDGLENPIRSFGYNETVDGNHDNYLWGNTAFLMASRITDSFARYRWCPNIIGPQ
SGGAVDDLPVHLYESLGQLQAKIPTEVLISDRKEFELSEAGFIPLTMRKDSDNAAFFSAN
SVQKPKNFPKTREGQEAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERQDLERE
LNTWLKQYIADQENPSSDVRSRRPLRAAQIVVQDVAGDPGWYQVSLAVRPHFKYMGANFE
ISLVGRLDTQ
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggaaagcgccgccgcccaagtgctggtgaccgacgaacaaccgtcgctgctggatcaa
ctgctggccaacaccaccatccgcccctctcaggaaggctatgccattgctcgccaaggt
gtagctgcgttcatcagcgaaattctgcaaagcggcgaccatcagcagccggttaataag
catcgggtcgaccagatgattgccgaaatcgaccacgccttgagcaagcagatggacgtg
attctgcatcaacctcagttccagcaactggaatcggcgtggcgtggtctgaaactgttg
gtggatcgcacggattttcgcgagaacatcaagctggaagtgctgcatgtcaccaaagaa
gaactgctggacgacttcgacaacgctggcgacatcacccgcagcggcttgtacaagcac
gcctatacctccggttacggccagttcggtggcgagcccatcgcggcgatgattggcaac
tacaccttcggtccctcctctccagacatgaaactgctgagctatatcgcctccgtgggc
gccatggcccatgcccctttcgtgatggctgccggtcctgagttcttcaacctcaagagc
tatcaggacctgccgtcagtcaaggaagtcagcgatatcttcgaaggccccggccacacc
aaatggcgtagcctgcgcgaaatggaagactccaaatacatcgccgcgacactaccgcgc
tttcttttgcgctcgccttacgatgggctggagaacccgattcgcagcttcggctacaac
gaaaccgtcgacggcaaccacgacaactacctgtggggcaataccgcgttcctgatggct
tcgcgcatcaccgacagcttcgcccgctatcgctggtgcccgaacatcatcggcccgcaa
tccggtggtgccgtggatgacttgccggtgcacctgtacgaatccctcggccaattgcag
gccaagatccccaccgaagtgctgatctccgaccgtaaggaattcgaactgtcagaagcc
ggcttcatcccactgaccatgcgcaaggacagcgacaacgcagcgttcttctcggccaac
tcggtgcaaaaaccgaaaaacttccccaagacccgcgaaggccaggaagcccagaccaac
tacaagctcggcacccagttgccgtacctgtttatcgtcaatcgcctggcccactacatc
aaggtgctgcaacgcgaacagatcggcagttggaaagaacgccaggacctggaacgcgaa
ctcaacacctggctcaagcagtacatcgccgaccaggaaaacccttcctccgatgtgcgc
agccgtcgccccttgcgtgccgcgcaaatcgtcgtgcaggacgtggccggcgatccgggc
tggtaccaggtgtcgttggcggtgcgtccgcacttcaagtacatgggcgccaatttcgag
atctcgctggtcggtcggctggacacccaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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