KEGG   Pseudomonas azotoformans: AYR47_22900
Entry
AYR47_22900       CDS       T04879                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pazo  Pseudomonas azotoformans
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pazo03032]
    AYR47_22900
   03400 DNA repair and recombination proteins [BR:pazo03400]
    AYR47_22900
Enzymes [BR:pazo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AYR47_22900
DNA replication proteins [BR:pazo03032]
 Prokaryotic type
  DNA Topoisomerases
   AYR47_22900
DNA repair and recombination proteins [BR:pazo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AYR47_22900
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AMN80977
UniProt: A0A127I2Q9
Position
5010554..5011591
AA seq 345 aa
MSDSALPRDLHYVDDTQPGIRRKTLRGKFQYFDPKGERIHDADEIKRLNALAVPPAYTDV
WICADPRGHLQATGRDARGRKQYRYHPRWREVRDTDKYSRLQEFGSALPKLRKQLEAQIA
EPGFTREKVLATVVTLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIKFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSHDVNDYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVSMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSKLPKPRIRKGLKAEEVALAMFLEQLAAHLPKKAKTG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtccgactctgcgctaccccgcgacctgcattacgttgacgacacccagcccggcatc
cgccgcaagacgctgcggggcaagttccagtatttcgaccccaagggtgagcgcatccac
gacgccgacgagatcaagcgcctgaacgccctcgccgtcccgccggcttacactgacgtg
tggatctgcgccgacccgcgcggccacctgcaggccaccggccgcgacgcccgtggacgc
aagcaataccgttatcacccgcgctggcgcgaagtgcgggacaccgacaagtactcgcgg
ctgcaggaatttggcagtgcactgccgaaattgcgcaaacagctcgaagcgcaaatcgcc
gaacccggatttacccgcgaaaaggtgctggccaccgtggtgacgctgctcgacgctacg
ctgatccgcgtcggtaatacccagtacgcccgcgacaacaagtcctatggattgaccacc
ctgcgcacccgccatgtggatgtcaaaggcagcgaaatcaagttccagtttcgcggcaag
agcggcgtcgagcaccaaatcagcgttaaagaccggcgactggcaaccgtggtcaaacgc
tgcctggaattgccgggccagaacctgttccagtacctcgatgaagacggcgagcggcac
accgtcagctcccacgacgtgaatgactatctgcacagcctcaccggcgccgatttcacc
gccaaggactaccgcacctgggccggcactgccatggcgctggccgtgttgcgggagttg
gagtggcagcctgagtccgatgccaaaaggcatgttgtgtcgatggtcaaggatgtcgcc
aaacagcttggcaacaccccagcggtgtgccgcaagtgctacatccaccctgccgtgctg
gagcatttcagcctcggcgaactctccaagctgcccaagccgcgcatccgcaaagggctc
aaggccgaagaagtggccttggcgatgtttcttgagcaactggcggcgcacttgccgaaa
aaagccaagacgggttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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