KEGG   Pseudomonas azotoformans: AYR47_28305
Entry
AYR47_28305       CDS       T04879                                 
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
pazo  Pseudomonas azotoformans
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pazo03016]
    AYR47_28305
Enzymes [BR:pazo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     AYR47_28305
Transfer RNA biogenesis [BR:pazo03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AYR47_28305
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_8 GIDA FAD_binding_3 Pyr_redox_2 Pyr_redox 3HCDH_N FAD_oxidored FAD_binding_2 HI0933_like Lycopene_cycl
Other DBs
NCBI-ProteinID: AMN81967
UniProt: A0A127I5I3
Position
6157330..6159318
AA seq 662 aa
MNPITHAQLDWDDQGRPHSRVFDDVYFSDKSGLEETRYVFLEQNRLQERFAALPVDGRLV
IGETGFGTGLNFLCAWQLFEQHAVEGARLHFVSVEKYPLSHADLQRALALWPELQSFAEQ
LLAQYIAIHQGFQRLVLDNGRVTLTLLIGDALEQLPQLEAQVDAWFLDGFAPAKNPDMWT
AELFAELARLAAPGSTISTFTSTGWVRRLINAAGFKMKRTPGIGHKWEILRGEFLGWPAE
TPAPAAAKPWFARPPAIEGERHAMVIGGGLAGCATAASLAARGWRVSLLERHAALAQEAS
GNPQGVLYLKLSAHGTALSQLILSGFGHTRRQLEHLHRGVDWDGCGVLQLAFDAKEAERQ
AKLAEAFAPELLHVLDKDQAQQRAGIQLEQGGLFFPEGGWVHPPALCQWQTAHPMISVLP
HHHAVELRHVDNQWQALDGNRLLASARVVVLAGAADIKHFPASSELPLKRIRGQITRLAQ
TPASEALATVVCAEGYVAPARLGEHTLGASFDFNSDDLTPTAAEHAGNLEMLRDISEDLL
VRLGADHLDPEGLEGRAAFRCTSPDYLPIVGPLADLALFNQTYAVLSKDARQVPDTPCPW
LPGLYINSGHGSRGLITAPLCGELVAAWIDAEPLPLPASVAEACHPNRFALRALIRAKST
AS
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgaaccccatcacccacgcccagctcgactgggatgaccaaggtcgcccgcattcgcgg
gtgtttgacgacgtgtacttctccgataagtcgggcctggaagaaacccgttatgtgttc
ctcgaacaaaaccgactgcaggagcgttttgccgccttgccggtggacgggcggttggtg
attggcgagaccggtttcggcaccggattgaattttctgtgcgcctggcaactgttcgaa
cagcacgcggtggagggtgcgcgcctgcattttgtcagtgtggaaaagtacccgctgagc
cacgccgacctgcaacgcgccctcgccctctggccagagctgcaatcctttgccgaacaa
ctgctggcgcagtacatcgcgatccatcaaggcttccaacgcctggtactggataacggt
cgcgtgaccctgaccctgttgatcggcgacgccctggagcaactgccacaactggaagcg
caggtcgacgcgtggttcctcgacggtttcgcccccgcgaaaaacccggatatgtggacc
gccgaactgttcgccgaactggcacgcctggccgcgccgggttcgaccatcagcaccttc
accagtaccggttgggtgcgacggctgatcaacgccgcaggcttcaagatgaaacgcacg
ccgggcatcggccacaagtgggagatcctgcgcggcgagttcctcggttggcccgccgaa
acacctgcaccggccgccgccaaaccctggtttgcgcggccaccggcgattgaaggtgag
cgccacgccatggtcatcggcggcggcctcgccggttgcgcaacggccgccagcctcgcc
gcccggggctggcgcgtcagcctcctggagcgacatgccgcactggcccaggaggcttcg
ggcaacccccagggcgtactctatttaaagctctcggcccatggaacggcgttatcgcag
ttgatcctgagcggtttcggccacacccggcgccagttggaacacctgcatcgcggggtc
gactgggatggttgcggcgtgctgcaactggccttcgatgccaaggaagccgagcgccag
gcaaaactggccgaagcctttgcgcctgagttgctgcacgtgttggataaagatcaggcc
cagcaacgtgccggtatccaactggaacagggcgggttgtttttccccgagggcggttgg
gtgcatccgccggcgttgtgccaatggcaaacagcgcaccctatgatcagcgtgcttccc
catcaccacgcggttgagctgcggcacgtcgataaccagtggcaagccctcgacggcaat
cggctgttggccagcgcccgcgtggtggtgctggccggcgcagccgacatcaagcatttt
ccggcgagcagcgagctgccgctcaagcgcatccgcgggcaaatcacccgattggcgcaa
accccggcgagcgaagcactggcgaccgtggtctgcgccgaaggctatgtcgccccggcc
cgcttgggcgaacacactctcggcgccagctttgactttaacagcgacgacctcacgccc
accgccgctgaacacgccggcaacctggagatgctgcgggacatctccgaagacttgctg
gtccgcctgggcgccgaccacctcgaccccgaggggctggaaggccgcgccgccttccgt
tgcaccagccccgactacctgcccattgtcgggccgctggccgatctcgcgctgttcaac
caaacctatgccgtgctgagcaaggacgcccgacaagtgccggacacgccctgcccctgg
ctgccaggcctgtacatcaacagtggccacgggtcgcgcggactgatcaccgcgccgttg
tgcggcgaattggtggctgcctggattgatgctgaaccgctgccgctgccggccagcgtg
gccgaggcgtgccatccgaatcggtttgccttgcgcgcgttgatccgggccaagtcgacc
gcatcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (32)   

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