KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a134
Entry
PSEBR_a134        CDS       T01472                                 
Name
(GenBank) Putative DNA-binding protein, alpha subunit
  KO
K05787  DNA-binding protein HU-alpha
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:pba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pba03032]
    PSEBR_a134
   03036 Chromosome and associated proteins [BR:pba03036]
    PSEBR_a134
   03400 DNA repair and recombination proteins [BR:pba03400]
    PSEBR_a134
DNA replication proteins [BR:pba03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PSEBR_a134
Chromosome and associated proteins [BR:pba03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PSEBR_a134
DNA repair and recombination proteins [BR:pba03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PSEBR_a134
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: AEA66266
UniProt: F2KB77
Position
160707..160982
AA seq 91 aa
MRKPELAAAIAEKADLTKEQANRVLNAVLEEITGALHRKDSVTLVGFGTFLQRHRGARTG
KNPQTGEPVKIKASNTVAFKPGKFLKDSVNP
NT seq 276 nt   +upstreamnt  +downstreamnt
atgcgtaaaccagaactcgccgccgccatcgcggaaaaagcagacctcaccaaagaacaa
gccaaccgcgtcctcaacgccgtcctcgaagaaatcaccggcgccctgcaccgcaaggac
agcgtcaccctggtgggcttcggcactttcctgcaacgccaccgcggcgcccgcactggc
aagaacccacagaccggtgagccggtgaagatcaaggccagcaacaccgttgccttcaaa
ccaggcaagttcctgaaagacagcgtcaacccgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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