KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3861
Entry
PSEBR_a3861       CDS       T01472                                 
Name
(GenBank) tRNA-pseudouridine synthase I
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:pba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pba03016]
    PSEBR_a3861
Enzymes [BR:pba01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     PSEBR_a3861
Transfer RNA biogenesis [BR:pba03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PSEBR_a3861
 Prokaryotic type
    PSEBR_a3861
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AEA70251
UniProt: F2KJM5
Position
complement(4719400..4720254)
AA seq 284 aa
MANIDNPAAEMAADGFFRIALGVEYNGSRYRGWQRQASGVLTVQETLENALSKVADSPVS
LHCAGRTDAGVHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAK
SPIKELHHLRVTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRI
RRSGGVTAHPFGLYLVQVEYRDEFELPERYIGPHFLTGFSELDG
NT seq 855 nt   +upstreamnt  +downstreamnt
ttggcaaacatagacaacccggccgccgaaatggcggccgacggctttttccggatcgcc
ttgggcgttgaatacaacggctcgcgctatcgtggctggcagcgccaggcttccggtgta
ttgactgtgcaggaaacccttgaaaatgccctgtccaaagtcgccgactcgcccgtgtcg
ctgcattgcgccggtcgtaccgatgctggtgtgcatgcctgcggccaagtggtgcatttc
gacacccaggtcgagcgctcgatgaaggcctgggtgatgggcgccaacatcaacttgccc
cacgatgtcagcgtcagttgggccaaggtgatgccggcgcacttccatgcacgcttcaag
gccatcgcccggcggtatcgctacgtgatctataacgatcagatccgcccggcgcacctg
aacgaagaaatcacctggaatcaccgcccgctggacgtcgagcgcatggccgaggccgcg
caatacctggtcggcgtccatgatttcagcgccttccgtgccggccagtgccaggccaag
tcgccgatcaaagagttgcatcacctgcgcgtgacccgtcacggcaagatgatcgtgctc
gacatccgcgccagcgcgttcctgcatcacatggtgcgcaacattgccggcgtgctgatg
accattggtgctggcgaacggccggtggagtggatcaaggaagtgctcgacagtcgcatc
cggcgctccggtggcgtcacggcgcacccgtttggcttgtacctggtacaggtcgaatat
cgcgatgaattcgagctgccggagcgttacatcgggccacatttcctcacgggcttctcg
gaactcgacggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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