KEGG   Paenibacillus barcinonensis: HUB98_08315
Entry
HUB98_08315       CDS       T06922                                 
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
pbac  Paenibacillus barcinonensis
Pathway
pbac00730  Thiamine metabolism
pbac01100  Metabolic pathways
pbac01240  Biosynthesis of cofactors
pbac04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:pbac00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    HUB98_08315 (thiI)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    HUB98_08315 (thiI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbac03016]
    HUB98_08315 (thiI)
Enzymes [BR:pbac01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     HUB98_08315 (thiI)
Transfer RNA biogenesis [BR:pbac03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    HUB98_08315 (thiI)
SSDB
Motif
Pfam: ThiI THUMP QueC tRNA_Me_trans NAD_synthase Asn_synthase
Other DBs
NCBI-ProteinID: QKS60032
Position
complement(1773769..1775010)
AA seq 413 aa
MNYDMLLLRFGEFMLKGKNRARFEKTIITQVKALLKPYPGASLRKEYGRVYVDLGGESHT
QLIPVLKRVFGVMSISPVKVTPSEMDAIVQTAVAFMDERAEEFGEGTTFKVNARRVWKAF
PHSSHETNHLVGSPILRKFQQLKVDVRDPDIELRVEIREQGTYIFSEVIAAAGGFPLGTN
GKAMVLLSGGIDSPVAAWSSMRRGLEVECVHFYSYPFTSQRAKEKVIDLARALADHAGTM
KLHLVPFTEIQTAFTQLGQDNLIITLMRRSMLRIATKLAERERALALITGDSLGQVASQT
LPSMNVIGRATDLPLLRPLVMMDKQEIVTLSKQIGTYDISILPYEDCCTLFVPKSPATNP
NLRIVDKIEATMSQLPEWLDQAVEQTETIILHAGEAPVLTGQSENNEMKDDWF
NT seq 1242 nt   +upstreamnt  +downstreamnt
ttgaattatgatatgctgctgcttcgttttggagagtttatgttaaaaggcaaaaatcgt
gcgcgcttcgaaaaaacgattattactcaagtcaaagcgctgctcaagccttaccctgga
gcatcgctgcgtaaagaatacggacgggtttacgtggatctcggcggggagtctcataca
cagctcatcccggtgctaaagcgagtatttggtgtaatgtcaattagccctgtcaaagtt
actccgtctgagatggatgccattgtgcaaacggcggttgcatttatggatgagcgtgct
gaggaattcggagaaggcacaaccttcaaagtaaatgcgcggcgggtatggaaggcgttc
ccgcattcttctcatgaaaccaatcatctggtcggctcgccgattctacgcaaatttcag
cagctgaaggtggatgtccgtgatcctgatattgagctacgggtggaaattcgcgagcaa
ggcacgtatatcttcagtgaagtcattgctgccgcaggcggattcccgctcggaacaaac
ggcaaagcgatggtgttgttatctggtggcattgacagccctgtagcggcatggtcttca
atgcgtcgtggcttggaagtagagtgtgtgcacttctacagttatccttttactagtcag
cgtgccaaagaaaaggtcattgatctggctcgtgcgcttgccgatcatgcaggtacgatg
aagctgcatctcgttcctttcacggagattcagacagcgttcacccagttggggcaggac
aatctgattattacactaatgcgtcgttcgatgctgcgtattgcaaccaagctggctgag
cgtgagcgtgcccttgccctgattaccggagatagtctgggtcaggttgcgagccaaacg
cttccaagcatgaatgtcatcggacgcgctacggacctgccgctactgaggccgctggtt
atgatggacaaacaggagattgttacactatccaaacagattggcacctatgatatttcc
attttgccttatgaggattgttgtacattgtttgttccaaaatctccggccaccaatcct
aatcttcgcatcgttgacaaaattgaagcaacgatgagccagctgccggaatggctggat
caggcggttgaacagaccgaaacaattatattgcatgcgggagaagctcccgtgcttact
gggcagtcagagaacaatgagatgaaggatgactggttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system