KEGG   Paenibacillus barcinonensis: HUB98_28105
Entry
HUB98_28105       CDS       T06922                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pbac  Paenibacillus barcinonensis
Pathway
pbac02020  Two-component system
pbac02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pbac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HUB98_28105
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HUB98_28105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbac03021]
    HUB98_28105
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pbac02035]
    HUB98_28105
Transcription machinery [BR:pbac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HUB98_28105
Bacterial motility proteins [BR:pbac02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    HUB98_28105
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_38 Sigma70_ECF HTH_23 PCI 7TMR-HDED
Other DBs
NCBI-ProteinID: QKS59689
Position
6156832..6157620
AA seq 262 aa
MNERKASHLNHSDLWEKWKEHGDLEAKKMLIERYLHIVNYVSGRLAVGLPKNVPKDDLES
NGVMGLIDALEKFDYERGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKRIEDAYQQ
LEQTYLRSVSDEEMSQYLDVSTKDFQHMLQEVAVMSLCSLEDPIREEESETRLSLMIDEK
AKNPDYKVNEFYLKEALVQGLEKLTVKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLDKQKDLLMRKD
NT seq 789 nt   +upstreamnt  +downstreamnt
ttgaacgagcgtaaagcttcacatttgaaccattctgatctgtgggaaaagtggaaagaa
catggagatcttgaagccaaaaagatgttgatcgaaagatatcttcatattgtaaattat
gtgtcaggccgacttgcagttggtttacccaaaaatgttccaaaagatgatcttgaaagc
aatggggtaatgggccttattgatgcgctcgaaaaattcgattatgaacgaggtctgcaa
tttgagacttatgcttcatggagggtacgcggagctatccttgatggattgcgtcaaggt
gactgggttcccagatcagtacgagaaaaagcaaaacggattgaagatgcctatcagcag
ctggagcagacctatctgcgttctgtcagcgatgaagaaatgagtcagtatctggacgtg
tcaaccaaggattttcaacatatgctccaggaggtggctgtgatgtcgctctgttcgctg
gaagatccaattcgtgaagaagagtctgaaacccgtctatccctaatgattgatgaaaag
gctaaaaatccggattataaagtcaatgagttttatctgaaggaagcgctggtgcagggg
ctagagaaattgacagtgaaagaacgaacggtagtttcacttctgtattatgaagatctt
tctctaagtgagatcgcagaggtcatgtctctttcgccgtctcgtatctcccaattacat
tccaaagccattttgcgtctgcgaggcacattggataaacaaaaagatttgctgatgcgt
aaagactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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