KEGG   Pogonomyrmex barbatus (red harvester ant): 105425005
Entry
105425005         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase pitchoune
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbar03041]
    105425005
   03009 Ribosome biogenesis [BR:pbar03009]
    105425005
Spliceosome [BR:pbar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    105425005
Ribosome biogenesis [BR:pbar03009]
 Eukaryotic type
  90S particles
   Helicases
    105425005
  Pre-60S particles
    105425005
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 AAA_30 AAA_22 RpoY
Other DBs
NCBI-GeneID: 105425005
NCBI-ProteinID: XP_011633827
Position
Unknown
AA seq 590 aa
MSVPEKVLMRKIXKREKTKLTIRQEKQKDVTELEKISEISQQNVEKISPKKKKKLKMSKE
AEKYEVTKKLLVTESLPGTAIGFEATNDTSFSVLSEKVCENTLKAIKDMGFTNMTEIQAK
AIPPLLEGRDLVGAAKTGSGKTLAFLIPAIELIYKLKFMPRNGTGCIIMSPTRELSMQTF
GVLKELMKYHYHTYGLLMGGASRQTEAQKLEKGINIIVATPGRLLDHLQNTPDFLYKNLQ
CLVIDEADRILDIGYEEELKQIINILPKRRQTMLFSATQTQKVAAITTLALKKEPIYVGV
DDDKEMATVEGLQQGYVICPSEKRFLLLFTFLKKNRKKKMMXFFSSCMSVKFHHELLNYI
DLPVMSIHGKQKQMKRTTTFYQFCNASSGILLCTDVAARGLDIPDVDWIVQYDPPDDPKE
YIHRVGRTARGEGSSGHALLILRPEELGFLRYLKEARVPVNEYEFSWNKIADIQLQLEKL
ISKNYFLHQSAKEAFKNYIRAYDSHHLKQVFDIETLDLAKVAKSFGFIVPPAVDLKVGIS
KSSRPRKRLGGGGYGHFKNINDPSSAKRLKRTKTFCQAGKRRQDNRQFSR
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtccgtgcccgagaaagtgttaatgcgaaaaattnaaaaacgagagaaaacaaaatta
acgatacgccaagagaagcaaaaagatgtgactgaactagaaaaaatatctgagataagt
cagcaaaacgtggaaaaaatttctccaaaaaaaaagaagaaattaaaaatgtcaaaagaa
gcagaaaagtatgaggtaaccaagaaactcctggttactgagagtttacctggcacagct
ataggttttgaagcgacaaatgataccagtttctcggtattgagcgaaaaagtatgtgaa
aatacgctaaaggcgataaaggatatgggttttacaaatatgactgagatacaagcgaag
gctattccaccccttttagaagggagagatttggttggtgctgctaaaactggatctggc
aaaaccttggcatttttaatccctgccattgaattgatttacaagttgaagttcatgccc
cgtaatggtaccggttgcattattatgtctcccacgagagaattgtctatgcaaactttt
ggagttttgaaggaattgatgaaatatcattatcatacatatggtctgctgatgggtggt
gccagtaggcaaactgaagcgcagaaacttgaaaaaggaattaatattatcgtggcgacg
ccgggacgattattagatcatttgcaaaacacacccgatttcttgtacaaaaatcttcaa
tgtctggtcattgacgaagccgatcgtattctggatatcggatacgaagaagaattgaag
caaattatcaacattcttccaaagcgtcgacaaactatgcttttcagcgcaacgcagacg
caaaaggtagcggcgataacaactttagcacttaagaaagaacccatatatgtaggagtc
gatgatgacaaagaaatggcgacagtggagggtttacagcaaggttacgtaatatgtccg
agcgagaaaagattcttacttctcttcacgtttttaaagaaaaacaggaagaagaaaatg
atgngttttttcagttcttgcatgtctgttaaatttcaccacgaacttctgaattatatt
gatttaccagtaatgagtatacatggtaaacagaaacagatgaaaagaactacgaccttc
tatcaattttgcaatgcctcttcgggaattttgctttgcactgacgtggccgcgagaggt
ctggatatacccgatgttgattggatcgtgcaatacgatccaccagatgatcccaaggaa
tacatccatcgagttggtcgaaccgctcgtggagagggcagcagcggccatgccttgcta
atattgcgaccagaggagcttggtttccttcgttatctcaaggaagctcgtgtacccgtg
aatgaatacgaattttcttggaataaaatagctgacatacaattacagcttgaaaaattg
atatcaaaaaattactttttacatcagtcggcaaaggaggcattcaaaaattatatcaga
gcatatgattcgcatcatttgaagcaagtttttgatatagagactctggatctggcgaaa
gtggccaaatcgttcggatttattgtaccaccagcagtagacttgaaagtgggaatcagt
aaatcttcacgaccacgaaaaaggctcggcggaggcggttatggtcattttaaaaacata
aacgatccgagttcggcaaaacggttgaaacgtaccaagaccttttgtcaggcaggcaaa
cgtaggcaagacaatcgacaattcagcagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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