KEGG   Pogonomyrmex barbatus (red harvester ant): 105426025
Entry
105426025         CDS       T04903                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013  Nucleocytoplasmic transport
pbar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105426025
   03015 mRNA surveillance pathway
    105426025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbar03019]
    105426025
   03041 Spliceosome [BR:pbar03041]
    105426025
Messenger RNA biogenesis [BR:pbar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105426025
Spliceosome [BR:pbar03041]
 Complex C
  Other components
   EJC/TREX
    105426025
SSDB
Motif
Pfam: Pinin_SDK_memA Viral_alk_exo RSB_motif
Other DBs
NCBI-GeneID: 105426025
NCBI-ProteinID: XP_011635389
UniProt: A0A6I9WTY3
Position
Unknown
AA seq 330 aa
SPIFFRIPQKRLLQEDRRRIITEFVNNDLPGGKRRWQSSNVEPKTVFSRLSAHPSIADDS
ADEDDSITKPAVSSRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQE
ETKLKAKEDKKAEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQF
QDWRNAQLSLASFIKTHAQPSIYYVPKRKHPQTDILLAQCTKELYEEIEKREKALVEELN
LIEIQIGLNKHSQNNFEESASLHTVEAPRSIEEGEENRDPNPEHNIETTINDNTDISMQS
IINENFDDEHTTEKKEEIQLDQVQPDANNG
NT seq 993 nt   +upstreamnt  +downstreamnt
agtccaatttttttcagaataccacaaaaacgattgctacaagaagatcgtcgaagaatt
ataacagaatttgtgaataatgatctacctggaggcaaacgacgttggcaaagttctaat
gtagaaccaaaaacagtttttagtcgattaagtgcacatccatctatcgcagatgatagt
gctgatgaagatgatagcattactaagcctgctgtatcatccagagtaatagccactcct
cgagaaattccttcgcgacaagaagttatccgacgagaaaggacagatgaacgcagtcga
caaagaaataaacgtatgtttggcgcacttttgggtactttacaaaagtttagacaggaa
gaaactaaactgaaagcaaaggaagataaaaaagcagaagtagaagctagagtagaagaa
gctagaagacgagaaaaagaagaattacgaagagaaagacaacaattgtttttgtcacgt
aaacgacaattagctgaagtacgagcactagaagcaaagcttgctcgtagtcgacaattt
caagattggcgcaatgcacaattatcccttgcttcgtttataaaaacacacgcacagcct
tctatttattatgtaccaaagcgaaaacatccacagacagacatattattagcgcagtgt
acaaaagaactttatgaggaaattgaaaaaagagaaaaagcattggttgaagaattaaat
ttaatagaaattcaaataggattgaacaaacattcacaaaacaattttgaagaatctgca
tctttacatactgtagaagctccacgttcaatagaggaaggtgaagaaaatcgagatccc
aatccagaacataatattgaaactacaattaatgataatactgatatttcaatgcaatcc
ataataaatgaaaattttgatgatgaacatactacagagaaaaaagaagaaatacaattg
gaccaagttcaaccagatgcaaacaatggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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