KEGG   Pogonomyrmex barbatus (red harvester ant): 105427141
Entry
105427141         CDS       T04903                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
  KO
K17043  ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbar03041]
    105427141
Enzymes [BR:pbar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105427141
Spliceosome [BR:pbar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    105427141
SSDB
Motif
Pfam: DEAD KH_1 MOEP19 KhpA-B_KH ResIII KH_2 CMS1 Anti-RecBCD_p2 VitK2_biosynth Ntox16
Other DBs
NCBI-GeneID: 105427141
NCBI-ProteinID: XP_011637060
UniProt: A0A6I9WDC9
Position
Unknown
AA seq 424 aa
MSGWESNRTSVRRYDRGYDHRRENRRERDSQFYRRSNRSFGDNWNNDSNTQNYHDNSYRK
NNENLDDANELVMYIDTNNIGRLIGRGGSKIKALQEESNAMINIDKQCAENGQTPVRLTG
TDEARQRAKSLIEELFDNVQENTEIAQRMKPEEKKEEIDWRNFDWGKANEEYEERQKQKW
ATLPPIIKNFYKEDSDVANMSKTKVAYIRKSNNNIEVKHVFENEGGSDEEIKIPNPIETF
EQAFQEYPDILKEIRKQGFEKPSPIQCQAWPILLNGQDLIGIAQTGTGKTLAFLLPALIH
IDGQVTPREERTGPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKAQINTVT
KGVQIVIATPGRLNDLVQAGVLDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQT
VMTR
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgagtggatgggaaagtaatagaacgtcagtaaggagatatgatcgaggctatgatcac
agaagagaaaataggagggaaagagacagtcaattttatagacgttctaatagatcattt
ggagataattggaataatgattcaaatacacaaaactatcatgacaattcatatagaaag
aataatgaaaatttggacgatgcaaatgaacttgttatgtacattgataccaacaatatt
ggaagacttattggaagaggaggtagcaaaattaaagctctacaagaagaaagcaatgct
atgattaatattgacaaacagtgtgctgaaaatggacagactcctgtaaggctaaccggt
acggatgaagcgcgacaacgagctaaaagtttaatagaggaattatttgataatgtgcaa
gaaaatacagaaattgcgcaaagaatgaaacctgaggagaaaaaggaagaaattgattgg
cgcaatttcgattggggcaaggctaatgaagaatatgaggaacgtcagaagcaaaagtgg
gcaactttgcctccaattataaaaaatttttataaggaagattcagatgttgctaatatg
tcgaagacaaaagtagcttatattagaaaaagtaataataatatagaagttaagcatgtt
ttcgaaaatgaaggaggctccgatgaagaaataaaaataccaaatcctatcgaaactttc
gaacaagcttttcaggaatatccagatatccttaaagaaatacgaaaacaaggatttgaa
aaaccaagtcctatacaatgtcaagcatggcctattcttctgaatggtcaagatctcatt
ggaatagcgcaaactggaacaggtaaaactcttgcttttctactacctgccttgattcat
attgatggacaagtaactccacgtgaggagcgtactgggccaaatgtgctcgttatggca
ccgacaagagaattagcactacagattgaaaaagaagtaggaaagtattcttatcacggc
attaaagcggtatgtgtatatggtggtggaaatcgcaaggctcaaatcaatactgtaacg
aagggtgtgcagatagtaattgcaactcctggaagattaaacgacttggttcaagcaggt
gtattagatgtatcagctgtaacgtatcttatacttgacgaagcagatcgtatgctggac
atgggttttgaaccacaaattcgtaagactctcttgggtgtgcgaccagatagacaaact
gttatgacaaggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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