KEGG   Thiopseudomonas alkaliphila: AKN87_01030
Entry
AKN87_01030       CDS       T04152                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
pbb  Thiopseudomonas alkaliphila
Pathway
pbb00550  Peptidoglycan biosynthesis
pbb01100  Metabolic pathways
pbb01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:pbb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AKN87_01030
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    AKN87_01030
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pbb01011]
    AKN87_01030
Enzymes [BR:pbb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     AKN87_01030
Peptidoglycan biosynthesis and degradation proteins [BR:pbb01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   AKN87_01030
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: AKX43854
Position
212771..214660
AA seq 629 aa
MTSPIRLKDHERDARLIGQRLAIGAGLVVVVLVILLARMYYLQVIQYEHHSTLAENNRIH
VQPLPPARGLIYDRNGVILADNRPSFSLTLTRERAGDWPAVLDTLVEVLELTEEDRELFE
RRVRQGRRAFEPIPILFELDEQQIALIAVNQFQLPGVEVDAKLVRTYPQKEHFAHSVGYV
GRINEQDLKRIDNVAYSGTHHIGKTGLERFYEEQLHGQVGYEEVETNARGRVLRVLNRVE
AVSGQDLHLTLDVKLQEAAEKALADRRGAIVVIEVNTGEVLAMVSQPSFDPNPFVTGIGF
KAYAELRDSPDQPLYNRILRGLYPPGSTIKPMVAAAALDAGVITGTSRVFDPGFYQLPNN
SHKFRNWNRWGDGWVSLDLALARSNDTYFYDLAHRMGVDRLHEYMTRFGFGRRVALDMFE
ETGGIMPSREWKRARFKQVWYPGETLILGIGQGYMLSTPLQLAQATVLMATNGVWRRPRL
ARLIGDQAPVDPEPIADIVFKDASSWTLAKRGMESVVHGARGTARKVGQNAAYRIAGKSG
TAQVVAIKQGERYNRNKLNERHRDHALFVAYAPADRPEIAVSVMIENGESGSGVAGPVAK
QVMDAWLLDARGQLKEAFRQPRTPAEVQP
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgacgtctccgattcgcttaaaagatcatgagcgagatgccaggttaattggtcagcga
ttagccataggggcaggcttggtggtagtagtgctggtgatactgctggcgcggatgtat
tacttgcaggtcattcagtatgagcatcattcaaccctagctgaaaacaatcggattcat
gtgcagcctttgccgcccgcccggggcttaatttatgaccgcaatggcgtcattctggct
gataatcgcccaagttttagtttaacgctgacccgtgagcgggccggtgactggccggcg
gtattagataccttggttgaggtgttagagctgacggaagaagaccgtgaactgtttgag
cgtcgggtacgccaagggcggcgcgcttttgagccgattccgattctatttgagctagat
gagcagcaaattgccttaattgcggttaatcagtttcagttgccgggggtcgaggtggat
gccaagctggtgcgaacttacccgcaaaaagagcattttgcccactcggtgggttatgtt
gggcggattaatgagcaagacctcaaacgtattgataatgtggcctacagcggcactcac
catatcggtaaaaccggccttgagcgtttttatgaagagcagttacatgggcaagtgggc
tacgaagaggtagagaccaacgcccgagggcgagtactgcgggtactcaatcgagtcgag
gcggtttctggccaagacttacatctaacccttgacgttaagttacaagaagccgccgag
aaagccttagctgatcgtcgtggggcgattgtggtgattgaggttaacaccggtgaagtg
ttggccatggtcagtcagccaagctttgatcctaacccgtttgttactggcattggtttt
aaagcctatgctgagctgcgcgattcgccagaccaaccactgtataaccgtattttacgc
gggctgtacccgccaggctcgaccattaaaccgatggtcgctgccgctgctttagatgcg
ggggtgatcactggcaccagtcgggtgtttgatcctggattttatcagctgcccaataac
agccataaatttcgtaactggaaccgctggggcgatggctgggtgagtttggatttagcc
ttagcccgctccaatgatacctatttttatgacttagcccaccgtatgggggttgatcgc
ttacatgaatatatgactcgctttggttttggtcggcgggtagctttggatatgtttgaa
gagactggcggcattatgccgtctcgggaatggaagcgcgcccggtttaagcaggtatgg
tacccgggagaaaccctgattttaggcattggtcagggttatatgctgtcgacgccattg
cagttggcccaagcgacggtattgatggcaaccaatggggtgtggcggcgtccgcgctta
gcccgtttaattggtgatcaagcaccggtagatcccgaaccaattgctgatattgtgttt
aaagacgctagcagctggactttagctaagcgcggtatggaatcagtagtacatggtgcg
cgggggacagcacgtaaggttgggcaaaatgccgcctatcggattgccggtaaaagtggt
actgcccaggtagtagcgattaagcagggcgagcggtataaccgcaacaaattaaatgag
cgtcaccgtgaccatgcgctatttgtcgcctatgcaccagcggatcgtcctgaaattgcc
gtgtcggtgatgattgaaaatggtgagtcaggctcaggggtggcggggccagtggcaaag
caagtcatggatgcttggctattagatgctagggggcaattaaaggaagcgtttcgccag
ccacgtactccagctgaggtgcagccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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