KEGG   Thiopseudomonas alkaliphila: AKN87_01125
Entry
AKN87_01125       CDS       T04152                                 
Name
(GenBank) hypothetical protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
pbb  Thiopseudomonas alkaliphila
Pathway
pbb00790  Folate biosynthesis
pbb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pbb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    AKN87_01125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbb03016]
    AKN87_01125
Enzymes [BR:pbb01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     AKN87_01125
Transfer RNA biogenesis [BR:pbb03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AKN87_01125
SSDB
Motif
Pfam: Radical_SAM CsgG Fer4_12
Other DBs
NCBI-ProteinID: AKX43870
Position
complement(229617..230273)
AA seq 218 aa
MIKLATEPQFNIVEIFQSLQGEGYNTGMDAIFIRFGKCNLACPWCDTDYLSYSTLSLSEI
LKQVEALSATNIIITGGEPSVVPEIDLLLKQLKQRGYFLTIETNGLQPVPSEIDFISASP
KALYAKKYHSQMLTQADEVRIVVDGDVFDFCQFIEQHLPAKHYYLSPCEQITVSSSKTSS
PSFTLLETLQLLGRLNQRAQGQPHWQLSLQTHKLLGIR
NT seq 657 nt   +upstreamnt  +downstreamnt
atgattaagctggccacagaaccacagtttaatatcgtcgaaatttttcaaagcctgcaa
ggtgagggctataacaccgggatggacgctatttttatccgttttggtaaatgcaatctc
gcctgcccttggtgtgatacggattatcttagctatagcacgctgtcactcagcgaaatt
cttaagcaagtagaagctttgagtgcaaccaatatcattattaccggcggcgaacctagt
gtagtaccagagattgacctgctactaaaacaactcaagcagcgcggctactttctaacg
atagaaaccaatggcttacagccagtacccagtgaaattgactttattagtgctagccct
aaagcgctttacgccaagaaatatcatagtcagatgctaactcaagccgatgaggtgcgg
attgtagtggatggtgatgtctttgacttttgccagtttatagaacagcacttgcctgcc
aagcattactatctatcgccttgcgagcaaatcactgtatccagcagcaagacgtcttcc
ccttcctttaccttgcttgaaaccttacaactgctgggccggttaaaccaacgagcacag
ggccagccgcactggcagctgagcttacaaacccataaattgctaggtattcgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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