KEGG   Thiopseudomonas alkaliphila: AKN87_02945
Entry
AKN87_02945       CDS       T04152                                 
Name
(GenBank) exonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pbb  Thiopseudomonas alkaliphila
Pathway
pbb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AKN87_02945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbb03400]
    AKN87_02945
Enzymes [BR:pbb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AKN87_02945
DNA repair and recombination proteins [BR:pbb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AKN87_02945
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AKX44173
Position
604972..605787
AA seq 271 aa
MKLVSFNINGLRARPHQLSALVEKHQPDVIGFQETKVADEQFPSHLFDELGYHVHFHGQK
GHYGVALASKKAPLVIHKGFPDDAEDAQRRFIWGVYEDAQGTPITVMNGYFPQGENRAHE
TKFPAKRKYYEDLQQLLESQFTPQDPVIVMGDFNISPASEDIGIGEQNAKRWLRTGKTSF
LPEEREWLERLKNWGLGDSFRQLHPQVNDQFSWFDYRSRGFEDTPKRGLRIDLIMHSPAL
ADRLQDAGIDYELRAMEKPSDHAPIWLSLSN
NT seq 816 nt   +upstreamnt  +downstreamnt
atgaaacttgtttcatttaacatcaatggcctacgcgcccgcccccatcaactcagcgct
ttagtggaaaaacatcaacccgatgtgattggttttcaagaaaccaaagtcgctgacgag
caatttcccagtcacttatttgacgagcttggttaccacgtacatttccacggccaaaag
ggccattacggcgtcgccctagcctctaaaaaagcaccgctagtgattcataaaggtttt
ccagatgatgccgaagatgcccaacggcgctttatctggggtgtttatgaagatgctcaa
ggcactccgattaccgtgatgaacggctacttcccccaaggagaaaaccgcgcccacgaa
acaaaatttcccgccaaacgtaaatattatgaagacttacagcagctgctagaaagccaa
ttcaccccgcaggatcctgtgattgtcatgggcgactttaatatttcgccggccagtgaa
gacattgggattggcgagcaaaatgctaagcgttggttgcgcacggggaaaaccagtttc
ttacctgaagagcgtgagtggctggagcggttaaaaaactggggcttaggcgatagcttt
cgccagctgcatccacaagtaaatgatcagttcagctggtttgattaccgtagtcgcggc
tttgaggacaccccgaaacgcgggttacgcattgacttaattatgcactcgccggcgtta
gctgatcgcttacaagacgccggtatcgactatgaactgcgcgccatggaaaagccctcg
gaccacgcgcctatctggctgagcctaagcaactaa

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