KEGG   Pseudomonas brassicacearum DF41: CD58_27410
Entry
CD58_27410        CDS       T03174                                 
Name
(GenBank) choline dehydrogenase
  KO
K03333  cholesterol oxidase [EC:1.1.3.6]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc00984  Steroid degradation
pbc01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00984 Steroid degradation
    CD58_27410
Enzymes [BR:pbc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.3  With oxygen as acceptor
    1.1.3.6  cholesterol oxidase
     CD58_27410
SSDB
Motif
Pfam: GMC_oxred_C GMC_oxred_N DAO Abhydrolase_6 Pyr_redox_2 Abhydrolase_1 FAD_binding_2 FAD_oxidored NAD_binding_8 FAD_binding_3 HI0933_like Thi4 Pyr_redox GIDA Fer4_9 Fer4_2 DUF4917 Fer4_6 Lycopene_cycl GDI
Other DBs
NCBI-ProteinID: AHL36365
UniProt: W8QJA8
Position
complement(6124937..6128389)
AA seq 1150 aa
MTRISTPISDIQEHYDVIVIGSGYGGGIAASRLSRAGRKVCLLERGREIQPGEYPNTMLA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPGVFDDPR
WPLAVREHRDTLLKEGYARAREMLKPNPYPDSSPKLPKLDANRKSASYLKQDAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNGCGDCVSGCNNKAKNTTLMNYLPDAWNHGAEIFCQAEV
RHLERDGNGWIVHFQYLGSGRELFSAPTLFVRADIVVVSAGTLGSTEIMLRSRDKGLSMS
AQLGENMSGNGDILGFGHNCDQTINGIGFGAHSAKELEPVGPCITSIIDMRTEGDWRSRM
VIEEGSIPGALGRPMVPSMAAFAEMIGVPTDTGFGASLKYKGREAESFLRGPYYGALHNM
QTYLIMSHDNGKGRMVLDNKDQLRIDWPGVGEQENVTLGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDATQGVVNHKGQVFSGASGTDVYPGLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADWGWIIDYTLPSAPRKPVAPPTLGVQFTETMKGYFSSAFT
QAQGTDLTLYEAAAKRGKADNSSIEFTLTITAADLNRLIKEPEHAATLVGTLDAPLLSPK
PLVASNGVFNLFEQYQEQVGVRHMNYDMKLTAEDGSDYYFSAFKTVPEDDGVLNIWHDTS
TLYVTLYRGPDKTGEVIGSGVMHILPADFAKQMTTMKVLNARNERERVEALARFGKFFAG
ILWESYGGVFAGDIYFNPDAPPRLKRPLDAPAPTVHFFPTEDNVELRLTRYQAGSKGPVM
LVHGLGVGSNIFSTDTIHTNLLEYLCKHEYDVWLLDLRVSILLPASKHEWNGDQVAQYDF
KAAIEQIQLATLARDVQCVVHCYGATTFFMSMLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSLTAYADTKENWFNKLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNMHTFEHLALIVRKGHLVDFKGNDVYMPHFDRLKLP
ICFISGADNQCYLPQSTLKTYERLCDMHGPQLFSRHEVPGYGHIDCMFGKDAVVDVYPII
LEHLEKTALG
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgacacggatctcgacccccatcagtgacatccaggagcattacgacgtgatcgttatc
ggctcgggctatggcggcggtatcgctgcttcgcgcctgtcccgggccggacgcaaagtg
tgcctgctggagcgtggccgggagatccagcccggcgaataccccaacaccatgctcgcc
gccaccgaggaactgcaggtgcacgacccggacggccacatcggttcgcgtaccgggctg
ttcgacctgcacgtcaacgcccagcagaacgtggtggtcggttgcggcctgggcggcaca
tcgctgatcaatgccaacgtttccctcgagccggagcccggtgtgttcgatgatccgcgc
tggccgctggcggtgcgtgaacaccgcgacacgctgctcaaggagggctatgcgcgggcc
cgggagatgctcaagcccaatccttatccggattcgtcgccgaagctgcccaagctcgac
gccaaccgcaaatcggcgagttacctcaagcaggacgcgcatttctacaagccgcccatc
aatgtgaccttcgacaaactgcccaacaacctcaaccacgtcggcgtcgagcaattgccg
tgcaacggttgtggcgattgcgtctcggggtgtaacaacaaggcgaagaacaccacgttg
atgaattacctgccagatgcctggaaccacggcgcggagattttctgccaggccgaagtc
aggcacctggagcgcgacggcaatggctggatcgtgcacttccagtacctgggcagtggc
cgcgagctgttctcggcgccgaccctgttcgtgcgtgccgacatcgtggtggtgtccgcc
gggaccctgggttccaccgagatcatgttgcggtcccgggacaaaggcctgtcgatgtcc
gcccagttgggcgagaacatgagcggcaacggcgacatcctcggcttcggccacaactgc
gaccagaccatcaacggcattggcttcggcgcccattcggccaaggagctggagccggtg
ggcccgtgcatcacctcgatcatcgacatgcgcaccgaaggcgactggcgcagccgcatg
gtcatcgaggagggctcgatccccggcgcccttggccggcccatggtgccgagcatggcc
gcgttcgccgagatgatcggggtgcccaccgacacggggttcggggccagcctcaaatac
aaaggccgggaagccgagagtttcctgcgtggcccgtattacggcgcgctgcataacatg
cagacctacctgatcatgagtcacgacaacggcaaaggccgcatggtgctcgacaacaag
gaccagttgcgcatcgattggcccggcgttggcgagcaggaaaacgtcaccctcggcaat
gagcgcttgcaccagagcaccaaggcgctcggtgggatctgggtcgagaacccgatctgg
accaagctgctcaagcacagcatcgtgtcggtccatccgttgggcggttgcgtgatgggt
gaagatgcgacgcaaggcgtggtcaaccataagggccaggtgttcagcggcgccagcggc
acggatgtctaccccggcctctacgtgaccgacggtgcggtgatccccacctccctggcg
gtcaacccgctgctgaccatctcggcggtgagcgagcgcaacatgggtctgctggcggct
gactggggctggatcatcgactacacgctgccctcggccccacgcaaacccgtggcgccg
ccgaccctcggcgtgcagttcaccgaaaccatgaagggctacttttccagcgccttcacc
caggcccagggcaccgatctgaccctgtacgaagcggcggccaagcgcggcaaggccgac
aactcgtccatcgagttcaccctgaccatcaccgccgccgacctcaatcggctgatcaag
gaaccggaacacgccgcgaccctggtgggcaccctggatgcgccgctgctctcgcctaaa
ccactggtcgccagcaatggcgtgttcaacctgttcgagcaataccaggaacaggtcggc
gtgcggcacatgaactacgacatgaagctgactgccgaggacggcagcgattactacttc
agcgccttcaagaccgtgcccgaggacgacggcgtgctgaacatctggcacgacaccagc
acgttgtatgtcacgctgtatcgcggaccggacaagaccggcgaggtgatcggctcgggg
gtgatgcacattctgccggctgacttcgccaagcagatgaccaccatgaaagtgctcaac
gcccgcaacgagcgcgagcgcgtggaggcgctggcgcggttcggcaagttcttcgccggc
atcttgtgggagagctatggcggggtcttcgccggcgatatctacttcaacccggacgcc
ccgccccgtctcaaacgaccgctggatgccccggcgccgaccgtgcatttcttcccgacc
gaagacaacgtcgagctgcgcctgacccgttaccaggccggcagcaagggcccggtgatg
ctggtgcatggcctgggcgtgggctcgaatattttctccaccgacaccatccataccaac
ttgctggagtacctgtgcaagcacgagtacgacgtctggctcctggacttgcgggtgagc
atcctgttgccggccagcaagcacgaatggaacggcgaccaggtggcccagtacgatttc
aaggcggctatcgagcagatccagctagcgaccctggcccgtgacgtgcagtgcgtggtg
cattgttatggcgcgacgaccttcttcatgtcgatgctggcggggttgcaaggggtgcgc
tcggtggtctgttcacagatcgccgccgacacggtggtggccaccgctaccggtttgaaa
gccgggctgcacttgccgggcatgctcgacgccattggcatcaagtccctcacggcttac
gccgacaccaaggaaaactggttcaacaaactctacgacaaggccctcaacggttatgcc
cggatcgaggcccagggctactgcaccaacccggtctgccaccgcatcacattcatgtat
gcgtcgctgtaccgccacgacaccctcaacgaaaccttgcacgacaacctgcacgaattg
ttcggcgaatcgaacatgcacactttcgagcacctggcgctgattgtgcgtaaggggcac
ttggtggacttcaagggcaacgacgtctacatgccgcatttcgatcggctgaagttgccg
atctgcttcatcagcggcgccgacaaccaatgctacctgccgcagagcaccctcaagacc
tatgagcgactgtgcgatatgcacggcccgcaattgttcagccgccacgaagtgccgggc
tacggccacatcgattgcatgttcggcaaggatgcggtggtggatgtgtatccgatcatt
cttgagcacctggagaagaccgccctcggttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (35)   

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