KEGG   Pseudomonas brassicacearum DF41: CD58_28675
Entry
CD58_28675        CDS       T03174                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc00300  Lysine biosynthesis
pbc00470  D-Amino acid metabolism
pbc01100  Metabolic pathways
pbc01110  Biosynthesis of secondary metabolites
pbc01120  Microbial metabolism in diverse environments
pbc01230  Biosynthesis of amino acids
Module
pbc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CD58_28675
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CD58_28675
Enzymes [BR:pbc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     CD58_28675
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: AHL36606
UniProt: W8Q3B4
Position
6391874..6392704
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNM
GPPRLVPADIPFEAPAQALSYQVDVDGTTVELAAVSMGNPHAVLRVADINSAAVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaagcaatggggggatcggcacacc
ggtatcggtttcgaccaattgctgatcgtcgaggcgcccaacaaccccgacgtggatttc
cgctaccgtatcttcaatgccgacggttcggaagtggagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaaacgcctgaccgccaagcggcagatccgtgtcgag
accaaaagcggcatcatcgaactggatgtgcgcagtgatggccagatcggcgtcaacatg
ggccccccgcgcctggtaccggcggacattccgttcgaagcgccggcccaggccttgagc
tatcaggtggacgtcgacggcactacggtagaactggcggcggtgtccatgggcaacccc
catgccgtgctgcgagtggccgatatcaacagcgccgcggtgcatgagctggggccgaag
atcgagcaccatccgcgcttcccggcacgggtgaacgtcggtttcctgcaagtcatcgac
cgtcaccgcgcgcaattgcgcgtctgggaacgcggcgccggggaaacccaagcctgcggc
accggcgcttgtgcggcggcagtcgcggcgatcagccaggggtggatggattcgccattg
ttgatcgacctgccgggcgggcgcctgtccatcgagtgggcaggccctggccaaccggtg
atgatgaccggtccggcggtacgcgtatacgaaggacaagttcgtctttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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