KEGG   Paenibacillus borealis: PBOR_27525
Entry
PBOR_27525        CDS       T03324                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pbd  Paenibacillus borealis
Brite
KEGG Orthology (KO) [BR:pbd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbd03400]
    PBOR_27525
DNA repair and recombination proteins [BR:pbd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PBOR_27525
    Archaeal homologous recombinant proteins
     PBOR_27525
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_21 AAA_29 ABC_tran PMAIP1 zf-Mss51
Other DBs
NCBI-ProteinID: AIQ60280
UniProt: A0A089LJK0
Position
complement(6218450..6222028)
AA seq 1192 aa
MKPILLKLSGLQSYREQQEIDFASLTETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAV
NGTQGIMNHSEDQLSVAFTFELTSSSGARRYRVERKFKRTGEQSVSNTISRFIEVKDDGD
VVMADKLAEVTRCVEEHIGLKMDDFTRAVVLPQGKFAEFLSLRGVDRRQMLQRLFHLEQY
GDGLALKLSRRVKENEAALRALEAEQQGLGSAGKADVEAAAVRVQEAVRHAAECRKRLTE
AAARAERFARIRELQEEHARRGQQRQALQAQEEQILLLEQKLGKADDAEKRLPALKAWRS
AEEAWKSRLARAEGLEALASAASREAAVMAEAEAAAQAALTAEEPALRQEEGLFRRALEL
EAELGGLRQERAALLARGDEAARGLAAGRESLARERELLARGQKKQHELQRSLQPLAVRS
QERQSLQEAMQRLQGLRSAELQRESAEREHRGRAAVLTAAQARLAAAGSRRQALAAGRGE
LLAAAALHQEELQAAEGAAGAAAGRLEQHTSALEAALKEQEVHRLSLALARELQEGVPCP
VCGSQHHPSPALNQEQGEHEELDQRLRHVRILARQALETRHLFRSLLEQDGSWLAQLGGA
ASEEALEQTAATAAGIEQQPAVSSASRDSLASLESSATHDSPASHESSAHDSLASLESSA
ALESLGAPVSSGSLAVPAAADIPDEAALSGLNAQLVSLKASSGELRRAAADWQRSMQELE
QLYHKEAAGAEAEQTWVQGLAAKAEELAASAKKLREEWNRLFPKLAPEEAEKAYQEMLAK
DERAEEIRGRLEISVKFLDEKSLAVQALQEQIAGLDKELAQWDAQLEGKEALARDKEQRL
REWTGGRPAAALLAECERRLLELQAALERTRQGHRQAADKAQQQTREAAVARQAAESAHE
HYTAADSQWKETLQSSVFASAAEVEAASLETSERAQAAERVRAHREEEAECALQLRSLEE
KLEGAVLSGEEWQESQASLQKCREEDESSLQARARAERDLEDLQQRHIRWMELEGQRAEH
AAMQDRLSKLQTVLRGNAFVEYMAEEQLMQVCQSASQRLRFLSKQRYALEVDSGGGFVIR
DDGNGGVKRPVSTLSGGETFLTSLALALALSAQIQLRGQYPLQFFFLDEGFGTLDPDLLD
TVITSLERLHNDQLSVGIISHVPELRARLPRKLIVVPAEQGGGGSTILLEKM
NT seq 3579 nt   +upstreamnt  +downstreamnt
gtgaagccgatactactgaaattatccggactgcaaagttatagggagcagcaggaaatt
gattttgccagtctcactgagaccgggctgttcgggatctttggtccgaccggcagcggc
aaatccagcctgctggatgcgatcacgctggcgatgtacggtaaagtagagcgcgcggtg
aacgggacccaaggcatcatgaaccattccgaggaccagctcagcgttgccttcaccttc
gagctgacctcttcttccggggcccggcgttaccgggtggaacgcaaattcaaacggacc
ggtgagcaatcagtcagcaataccatcagccggttcatcgaggtcaaggatgacggcgat
gttgtaatggctgacaagctggcggaggttacccgctgtgtggaagagcatatcgggctg
aagatggatgacttcactcgggcggtggtgctgccgcagggcaaattcgccgagtttctg
tccctgcgcggtgtagaccgcaggcagatgctccagcgcctgttccatctggagcagtac
ggggacgggctggcccttaagcttagccgccgcgtcaaagagaatgaggcggcactgcgt
gctttggaggccgaacagcagggactgggcagcgcaggcaaggcagatgtggaagcggca
gctgtccgggtgcaggaggctgtccgccatgcggcagaatgccgcaagcggctcacggaa
gcggcggcgcgtgctgagcgcttcgcccgcatccgcgagctgcaggaggagcatgcccgc
cgcgggcagcagcggcaggctctacaggcccaggaggagcagattctcctcctggagcag
aagctcggcaaggctgacgatgccgagaaaaggctgcccgcgctgaaggcctggcgcagc
gcggaagaggcctggaagagccggctggcccgcgcggagggcctggaggctctggcctcc
gccgccagccgggaggcggcggtaatggcggaggcggaagcagcggcacaggccgcgctt
actgctgaagagccggccctccggcaggaggagggcctgttccgccgcgcgctcgagctg
gaagccgagctcggcgggctgcgccaggagcgcgcggcgctgctggcgcggggggacgaa
gccgcccggggcctagccgccgggcgggagagcctggcccgggagcgtgagcttttggcc
cgcggccaaaagaaacagcacgagctgcagcggagcctgcagccgctcgcggtccgctcc
caggagcggcagtctctgcaggaagccatgcagagactgcagggtctgcgttctgccgag
ctccagcgggagtcggcagaacgtgagcaccgcgggcgcgcagcggtgctcacggcggcg
caggcgcgcctggccgctgccggttcccggcggcaggcgcttgctgccgggcgcggggag
ctgcttgccgccgctgccctgcaccaggaagagctgcaggcggccgaaggtgcagcggga
gccgctgccggccgcctggaacagcacaccagcgcgcttgaagctgcgctgaaggagcag
gaggttcacaggctctcgctggcgctcgcccgtgaactccaggagggtgtgccctgccct
gtgtgcggcagccagcaccatccctcccctgcgcttaatcaggagcagggggaacatgaa
gagctggaccaacggctccgccatgtccgcattctggcccggcaggcgctggagacacgc
catttgttccgcagcctgctggagcaggacggatcatggcttgcccagctgggcggggca
gcgtccgaagaggcgctggagcagaccgctgctacggctgccgggatagagcagcagccg
gctgttagctctgcctctcgcgactctctcgcatctctcgagtcctctgcaactcacgac
tctcctgcatcccatgagtcctctgcacacgactcacttgcttcccttgagtcctcggcg
gcccttgagtcccttggagcccctgtgtcctctggatcacttgcagtccctgccgccgca
gacatcccggatgaagcagcattatccggtctgaatgcccagctggtctcgctgaaggcc
agttccggagaattgcgccgtgcggccgcagactggcagcgctccatgcaggagctggag
cagctgtaccacaaggaagcggccggtgctgaagctgagcagacctgggtgcagggtctg
gctgccaaagcggaggaactcgccgcctcggcgaagaagcttagggaagaatggaaccgg
ctatttccgaagcttgcgcctgaggaggcagagaaggcctatcaggagatgcttgccaag
gatgagcgggctgaggagatccgtggacggctggagatcagcgtcaagtttctggacgag
aagagccttgctgtacaggcactgcaggagcagatagccgggctcgacaaggagctggca
cagtgggatgcgcagcttgaaggcaaagaagcccttgcgcgtgacaaagagcagcgtctc
cgggaatggacaggcgggcgtccggcggctgcgctgctggccgaatgcgagcgcaggctg
ctggagctgcaggctgcgcttgaacgcacccggcagggacaccgccaggcggcggacaag
gcccagcagcagacgcgggaagctgcggttgcccgtcaggcggcagagtctgcgcatgag
cattatacggcagccgactcccagtggaaggagacgctgcagtcttcggtgtttgcttca
gccgctgaggttgaagccgcgtcactggagacctccgagcgggcacaggcggctgaacgg
gtgcgggctcaccgcgaggaggaagcggagtgtgccctgcagctacggagtctagaggag
aagctggagggtgctgtgcttagtggtgaggagtggcaggagagccaggcgtcactgcag
aagtgcagggaagaggatgagagttcactgcaggcccgcgcacgtgcggagcgtgatctg
gaggatcttcagcagcggcacatccgctggatggagcttgagggccagcgggcggaacat
gctgctatgcaggaccgcttgtccaagctgcagacggtgctgcgcggcaatgcctttgtg
gaatatatggcggaagaacagctgatgcaggtgtgtcagtccgcctcacagcgtctgcgt
ttccttagcaagcagcgctacgcgctggaagtggattccggcggaggtttcgtcatccgt
gatgacgggaacggcggtgttaaacggccagtctcgacgctatccggcggggaaaccttc
ctgacctcccttgcactggcgttagccttgtcagcccagattcagctccgtggacagtat
ccgctgcaattctttttcctggatgagggtttcggtacgctggacccggatctgctcgat
accgtgataacctcactggaaagattgcacaatgaccagctgtccgtgggcatcatcagc
catgttccggagcttcgtgcccgtctgccgcgcaagctgattgtagttcctgcagagcag
ggcggcgggggttcaaccattcttttggaaaaaatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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