KEGG   Python bivittatus (Burmese python): 103052772
Entry
103052772         CDS       T03091                                 
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X3
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
pbi  Python bivittatus (Burmese python)
Pathway
pbi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103052772 (PARN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbi03019]
    103052772 (PARN)
Enzymes [BR:pbi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     103052772 (PARN)
Messenger RNA biogenesis [BR:pbi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103052772 (PARN)
SSDB
Motif
Pfam: CAF1 RNA_bind R3H RRM_1 NCBP3
Other DBs
NCBI-GeneID: 103052772
NCBI-ProteinID: XP_007435966
UniProt: A0A9F2WGT0
Position
Unknown
AA seq 577 aa
MDFLLFQFGLCTFKYDHAESKYIMKSFNFYIFPKPFNRTSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGLGALSYMSPGTNKRPSAIPEDQKKFI
EKVIERIEGLLQNEESTNIQLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYMVI
SKVDEEERKRRGQQKQAKEQEELKDAVGFSRVIHALANSGKLVVGHNMLLDVMHTIHQFY
CSLPEDFSEFKELATCVFPRLLDTKLMASTQPFKEIIKNTSLAELEKRLKEVPFNPPKVE
SAEGFPSYNTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPQNHVSASSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLYVTFPKEWKTSDLYQLFSAFGNIQVCWIDDTSA
FVSLSQPEQVQIAVNTSRYAESYRIQTYAEYIEKKHEEKRQAKRKWAEDSWKEVEVKRLK
TQASPYALQSRYYSVNSFSTPSAVGKRSMSPIQEESATDDLEEAAVQGVDLAHPDTFLEP
IEGKKQVKKFKKAKKEQALGGGLKAAPTRLFDVPDTW
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggatttcttgctgttccagttcggcctgtgcacttttaaatacgaccacgcggaatct
aaatatatcatgaaatcatttaacttctacatcttccccaaacctttcaacagaacatca
ccagatgtcaagtttgtctgtcagagctcaagtatagattttttagcaaaccagggattt
gattttaataaagtttttcgcaacggtatcccttacttaaatcaagaagaagaaagacag
ttacgggagcaatatgacgagaagcgttctcaagccaatgggctgggggccttgtcatat
atgtcacctggtaccaataagcgtccatcggctattcctgaggatcagaagaagttcatc
gagaaagtcatagaaaggatagaaggtctcttgcagaacgaagaaagcaccaacatccag
ctggagccgtgcacagggtttcagaggaaactaatctatcagacgctgagctggaagtat
ccaaaaggcatccatgttgaaactctggaaacagaaaagaaggaacgatacatggtcatc
agcaaagtggacgaagaggagcgcaagagaagagggcaacagaagcaagcgaaggagcag
gaggaactgaaggacgctgtggggttttcacgagtcattcacgcccttgcaaattctggc
aagcttgtggtcggacacaacatgttactggatgtcatgcataccatccaccagttctac
tgctccctcccagaggatttcagtgagttcaaagaactagcaacatgtgtctttccaagg
ttattggacactaaattgatggcaagcactcagccattcaaggagattattaagaacaca
tccctggcagagttggaaaagcgtctgaaggaggtgcccttcaaccctccaaaagttgaa
agcgccgaagggtttcccagttacaacacggcttcagagcagcttcacgaagctggttat
gatgcctatatcacaggcctctgcttcatctccatggcaaacttcttaggttcatttctc
agccctccccaaaatcatgtatctgccagttcaaagctgatagagccttttttcaacaaa
ttatttctgatgagggtgatggacattccatatctcaatttggaaggaccagatttacaa
ccaaaacgtgatcatgtcctttacgttacgtttcccaaagagtggaagacaagtgacctt
taccagctttttagtgcttttggaaacattcaagtgtgctggattgacgatacctcagca
tttgtgtctttgagccagcctgaacaagtacagattgcagttaataccagcaggtacgca
gaaagttaccggatccagacttatgcagaatatattgaaaagaaacatgaggaaaagagg
caggcaaagagaaaatgggcagaagacagttggaaggaagtcgaggtgaaacggttaaaa
acacaggccagcccatatgcccttcaaagccgatactacagtgttaacagtttctcaact
cctagtgctgtggggaagagaagcatgagccccatccaagaggagagcgccacagatgac
ctggaggaagccgcggtccaaggggtggacctggcccacccagacaccttcctggagccc
atagaagggaagaaacaggtcaagaagttcaagaaagccaaaaaggagcaagctttgggt
ggggggctcaaggccgctcccaccaggctctttgatgttccagacacatggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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