KEGG   Python bivittatus (Burmese python): 103060884
Entry
103060884         CDS       T03091                                 
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
pbi  Python bivittatus (Burmese python)
Pathway
pbi03020  RNA polymerase
pbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103060884 (POLR2A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103060884 (POLR2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbi03021]
    103060884 (POLR2A)
   03400 DNA repair and recombination proteins [BR:pbi03400]
    103060884 (POLR2A)
Enzymes [BR:pbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103060884 (POLR2A)
Transcription machinery [BR:pbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     103060884 (POLR2A)
DNA repair and recombination proteins [BR:pbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103060884 (POLR2A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_R RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 103060884
NCBI-ProteinID: XP_007433343
UniProt: A0A9F2R1I7
Position
Unknown
AA seq 1930 aa
MSVTEAGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKP
VFHVGFLGKTMKVLRCVCFFCSKLLVDSNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNI
CEGGEEMDNKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKK
ILLSPERVHEIFKRISDEECFILGMDPKYARPEWMICTVLPVPPLSVRPAVVMQGSARNQ
DDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSG
RPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLSIDQVGVPRSIAANMTFAEI
VTPFNIDRLQELVRRGNSQYPGAKYIIRHNGDRIDLRFHPKPSDLHLQTGYKVERHMCDG
DIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRA
EIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGK
VPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENG
ELIMGILCKKSLGTSAGSLVHISYLEMGHDVTRLFYSNIQTVINNWLLIEGHTIGIGDSI
ADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTG
SSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKD
DYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMV
KYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRT
LQEEMVKDILSNAHIQNELEREFEKMKEDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKI
FHINTRLPSDLHPIKVVEGVKELSKKLVIVNGDDPLSKQAQENATLLFNIHLRSTLCSRR
MIEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVS
AKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANT
AIYYDPNPQNTVVAEDQEWVNVYYEMPDFDVTRISPWLLRVELDRKHMTDRKLTMEQIAE
KINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNML
TDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVD
PVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMA
ITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDL
LLDAEKCKYGMEIPTNITGLGVGGPTGMFFGSAPSPMGGVSPATTPWNQGATPAYGAWSP
SVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSY
SPTSPAYEPRSPGVYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTS
PNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYS
PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP
VYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPA
ISPDDSDEDN
NT seq 5793 nt   +upstreamnt  +downstreamnt
atgtcggtgaccgaagcggggatcaagtacccagagaccacagaaggaggtcgccccaag
cttggggggttaatggatcctcgccaaggtgtcatcgaaaggaccggacggtgccagacg
tgtgcaggcaacatgactgaatgtcctggccattttggccacattgagctggccaagccc
gtcttccatgtcggcttcttagggaagaccatgaaagtcctccgctgcgtttgtttcttc
tgctccaaactgctggtggactctaacaacccgaagatcaaagacatcttggcgaaatcc
aagggccagccgaagaagcggttgactcacgtctacgatctctgcaaaggcaagaacatc
tgcgaggggggagaagagatggacaacaagttcggggtggagcagccggaaggtgacgag
gacctcaccaaggaaaagggccacgggggctgcgggcgctaccagccgaggatccgtcgc
tcgggcttggagctgtatgccgagtggaagcacgtgaatgaggactcgcaagagaagaag
atcctgctgagccctgaacgcgtccatgagatcttcaagcggatatctgacgaggagtgc
ttcatcttgggcatggaccccaaatacgcccggcccgagtggatgatttgcaccgtgctg
ccggtccctccgctctcggtcagaccggccgtcgtcatgcaaggctcggccaggaatcag
gatgacttgactcacaagctggccgacatcgtgaaaatcaacaatcagctgcggagaaat
gaacagaacggggcggccgctcacgtcatcgcagaagatgtcaagcttctccagttccac
gtggccaccatggtggacaacgagctgccaggactgccccgtgcgatgcagaaatcaggc
cggccgctaaagtctctgaagcagcggctgaaggggaaagaggggcgtgtgcgggggaac
ctgatggggaaacgtgtggatttctcggcccggacagtcatcacgccggaccccaacctc
tccatcgaccaggtgggcgttcctcgatcgatcgccgccaacatgacctttgcagagatt
gtgactcctttcaacattgacaggctgcaggagttggtgcgcagagggaacagtcagtat
cccggagccaagtacatcatccggcacaatggtgacaggatcgacctccgttttcaccct
aagcccagtgacctgcacttgcagaccgggtacaaggtggagcgacacatgtgtgatgga
gacattgtcattttcaaccgccagccgaccctgcacaagatgtccatgatgggccacaga
gttcgtatcctgccgtggtccaccttccgacttaatctcagtgtgaccaccccatacaac
gctgactttgacggcgatgaaatgaacctgcaccttccccagtccttggaaacccgggca
gagatccaggagctggccatggtgccccgtatgatcgtcacgccccaatccaacaggcct
gtcatgggcatcgtgcaggacacgttgacagctgtccgcaagttcaccaagagggatgtc
ttcctggagaggggtgaagtgatgaacctgctgatgttcctgtccacctgggatggcaaa
gtccctcagccggccatcctcaagcctcgcccgctctggactgggaagcagatcttctcc
ctgattatcccaggacacatcaactgtatccggacccacagcacacatccggatgatgaa
gacagtggcccgtacaagcacatctctccgggagacaccaaggtcattgtggaaaacgga
gagctgatcatgggcatcttgtgcaagaagtctctgggcacctcagctggctccctggtc
cacatctcctacctggagatgggccatgatgtcactcgcttgttctacagcaacatccag
acagtcatcaacaattggctgctgattgaaggacacaccattggtatcggggactccatt
gccgatgccaagacctaccaggacatccagaacacgatcaagaaagccaaacaggatgtg
attgaggtcattgagaaagcacacaacaacgaactggagcccacgcctggcaacaccctg
cgccagacctttgagaaccaggtcaatcggatcctgaacgatgcccgagacaagacaggc
tcctctgcccagaagtccctctccgagtacaacaacttcaagtccatggtggtctccggg
gccaaaggctccaagatcaacatctcccaggtcatcgctgtggtggggcagcagaacgtg
gaagggaagcgcatcccctttggcttcaagcaccgcacgctgccccacttcatcaaggac
gactacgggcccgagagcaggggctttgtggagaactcctacttggccggtcttaccccc
acggagttcttcttccacgccatgggaggcagagaggggctgatcgacacggcagtcaag
accgcggaaacaggttacatccagcgtcgactgatcaagtccatggagtccgtcatggtg
aaatacgacgccaccgtgcgcaactccatcaaccaggtggtgcagctgcgttacggggag
gacgggctggctggggagagcgtggagttccagaacctggccaccctcaagccatccaac
aaagcttttgaaaagaagttcaagttcgattataccaatgagcgggcactgcggcggaca
ctgcaagaggagatggtgaaggacattcttagtaacgctcacatccagaatgagctggag
agggagttcgagaagatgaaggaggaccgggaggtgttgagagtcatcttccccacagga
gacagcaaggtagtccttccttgcaacctgctgcgcatgatctggaatgcccagaagatt
ttccacatcaatacgcgcctcccctccgacttgcaccccatcaaggtggtggagggcgtg
aaggagctgagcaagaagctggtgattgtgaacggggacgatcctctgagcaagcaggcc
caggagaacgccaccctgctcttcaacatccacctgcgctccacgctctgcagtcggcgc
atgattgaagagttccggctcagcggggaggccttcgactggctgctgggagaaatcgaa
tccaagttcaaccaggccatcgctcatcctggtgagatggtgggggcgttggctgcccag
tccctgggagagcctgcgacccagatgaccctcaacaccttccattatgctggggtctct
gccaaaaatgtgaccctgggagtgcctcggctcaaggaactgatcaacatttccaagaag
cccaagaccccttccttgactgtcttcctcctcggccaatctgcccgtgacgctgagagg
gccaaggacatcctttgccgcttggagcacacaaccctccgcaaggtgacggccaacacg
gccatctactacgaccccaaccctcagaacacagtggtggccgaggaccaggagtgggtg
aatgtctactatgagatgcccgactttgatgttacccgcatctccccttggctgctaagg
gtggagctggaccgcaagcacatgactgaccgcaagctcaccatggaacagattgccgag
aagatcaatgctggctttggagatgacctcaactgcatcttcaacgatgacaacgcagag
aagttggtgctgcggattcgcatcatgaacagtgatgagaacaagatgcaggaggaggaa
gaggtggtggacaaaatggatgacgacgtcttcctgcgctgcatcgagtccaacatgctg
acagacatgacccttcaaggcattgagcaaatcagcaaggtgtacatgcacctgccccag
accgacaacaagaagaaaatcataatcacagaagacggcgagttcaaagctctgcaggag
tggatcttggaaaccgatggtgtgagcctcatgcgtgtgctgagcgagaaagatgtggac
cccgtgcgcaccacctccaatgacatcgtggagattttcacggtgctgggcatcgaggct
gtgaggaaggctctggaacgagagttgtaccacgtcatctcctttgatggctcgtacgtc
aactatcgccacttggccctgctctgtgacaccatgacctgccgcgggcatttgatggcc
atcacgcggcatggcgtcaaccgccaggacacggggcctctcatgaagtgctcctttgaa
gagacggttgatgtcttgatggaagccgccgcccacggtgagagcgatcccatgaagggg
gtctcagaaaacatcatgctgggccagctcgcgcctgctggcaccggttgctttgacctc
ctgctggacgctgagaaatgcaaatacggcatggagatccccaccaacattaccgggctg
ggtgtcgggggccctacgggcatgttcttcggctctgcgcccagccccatgggcggggtg
tcgcctgccacaaccccgtggaaccaaggtgccacaccagcctacggcgcgtggtcgcca
agtgttgggagcggaatgactcccggggctgctggtttctctcccagcgcagcttcagat
gccagcggtttcagccctgggtattccccagcctggtcacccaccccggggtctcctggc
tctccagggccttccagcccgtacattccatcaccaggcggtgccatgtcgcccagctat
tccccaacctcacccgcctatgagccacgctccccgggagtatacacgccccaaagcccc
agctacagccccacctcgccctcctacagtcccacatctccttcttactctcctactagt
ccaaattacagccccaccagccccagctacagccccacctcgccaagttactcccccact
agccccagctacagcccaacgagtcccagctacagcccaaccagtcccagctacagccca
acgtcccctagctattctccaaccagccccagctacagccccaccagccctagttacagc
ccaacgtcacccagctacagtcccaccagcccaagttacagcccgacatcgcccagctac
agccctaccagcccgagttacagcccaacatcacccagctacagcccaacatcgcccagc
tacagccctacctctcctagctatagtcccaccagccctaattatagcccaacatctcca
aattatacccccacttcccccagctacagccctacttcccccagctacagcccaacctct
cctaattacaccccaacttctccaaactacagcccgacatctcccagttactcccctacc
agcccctcctacagtcctacctcgcccagctactctccctccagccctcgctatacccca
cagtcacccacttacaccccttcatcgcctagctacagccccagctcgcccagctacagc
cccaccagccccaagtacaccccgaccagcccgtcctacagccccagctctccagagtac
accccgaccagccccaagtacagcccgaccagccccaagtacagccccacttcgcccacc
tacagcccgaccacaccaaaatacagcccgaccagccccacctactcgccgacatcgcct
gtgtacaccccgacatcacccaagtacagcccgacgagtcctacttactcgcccacctcc
cccaagtacagcccgacctctcccacctattcgcccacctcccccaaaggctccacttac
tccccgacctctcccggctacagccccacatcgcccacctacagcctcaccagcccggcc
atcagccccgacgacagcgacgaagacaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (78)   

Download RDF
DBGET integrated database retrieval system