KEGG   Python bivittatus (Burmese python): 103063230
Entry
103063230         CDS       T03091                                 
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pbi  Python bivittatus (Burmese python)
Pathway
pbi03008  Ribosome biogenesis in eukaryotes
pbi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103063230 (XRN2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103063230 (XRN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbi03021]
    103063230 (XRN2)
   03019 Messenger RNA biogenesis [BR:pbi03019]
    103063230 (XRN2)
   03009 Ribosome biogenesis [BR:pbi03009]
    103063230 (XRN2)
   03016 Transfer RNA biogenesis [BR:pbi03016]
    103063230 (XRN2)
Transcription machinery [BR:pbi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     103063230 (XRN2)
Messenger RNA biogenesis [BR:pbi03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     103063230 (XRN2)
Ribosome biogenesis [BR:pbi03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    103063230 (XRN2)
Transfer RNA biogenesis [BR:pbi03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    103063230 (XRN2)
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 103063230
NCBI-ProteinID: XP_007421458
UniProt: A0A9F2QTN4
Position
Unknown
AA seq 957 aa
MGVPAFFRWLSRKYPSIIVSCTEEKPKECNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGVETVEEKQRIRQEILGKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLQYYIAD
RLNNDPGWKKITVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEIKDCQGLPKEKQGEHDQFADCPPGMEQE
FIFIRLCVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTENGYVNLERVQMIMLAVGEVEDSIFKKRKDDEENFKRRQKE
KRKRMKREQHSMLGGQYTPQPLGRGNRSSHQPISNPRHTAYEMRMQDRQNTTPSVSPNSS
FTSDGTPSPAGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDVNDKKFRRKVV
QSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMVSDFEKGTKPFKPLEQLM
GVFPAASGNFLPPTWRKLMTDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLR
AALSQVYPDLTSEEIRRNSLGGDILFVGKHHQLHDFILELYKSGEKEPVDTPPELCHGIQ
GKLTLNENPILPDESVQSPVPLLRDLTQNSAISINFKDPQFQDDFIFKAAVLSGAKKPAA
VLKPGDWEKTNNDGRTWRPQLGFNRDRRQVHLDQSAFRTLGHAMSRDRGQSGSGVYSNIG
PPGAYNQGNTYRPLLGRPQQQIPKLLSNLRSQDSWQGPTPLFQQPPQRFDRNSGATPLLA
WNRMPHSQGSPYQQNQYQGPGGPVNYPQRPSDRRERGRQGYGRPYPLPPSSGRYSWN
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgggggtcccggcatttttccggtggctgagccgcaaatacccctcgatcatcgtgtcc
tgcacagaagaaaagcctaaagaatgcaatggcatcaaaattccagttgacaccagtaag
ccaaaccccaatgaagtggaatttgataatttgtacttagatatgaatggcatcatccat
ccttgtacacatcctgaggacaagccagcacccaaaaatgaagatgaaatgatggttgca
atttttgagtatattgacaggctattcaacattgtgagaccaaggcggcttctctacatg
gcaatagatggagtggctccccgggcaaagatgaatcaacaaagatccagaagattcaga
gcatcaaaagaaggagtagagactgtagaagagaagcagagaattagacaagaaattttg
gggaaaggtggctttctacctccagaagaaattaaggaaagatttgacagcaattgcata
actccaggaacagaatttatggacaatcttgctaaatgtcttcagtattatatcgctgat
cgtttaaacaatgatccaggatggaaaaaaataacggttattttatctgatgcaagtgct
ccaggtgagggtgaacacaaaataatggattacatacgaaggcaaagagcccaaccaaac
catgacccaaacactcaccattgtttatgtggtgctgatgctgacctcattatgcttgga
ttagctactcatgaaccaaattttactataatcagagaagaatttaagcctaataaacct
aagccatgtggtctttgcaaccaatttggacatgaaattaaggactgtcaaggcctacca
aaagaaaaacaaggggagcatgatcagtttgcagattgtcctcctggtatggaacaagaa
tttatatttattcgcttatgtgttttgagagaatatttggaaagagagctaacaatggcc
agcttgcctttcacttttgatgttgaaagaagcatcgatgactgggttttcatgtgtttc
tttgtgggaaatgattttctccctcatttaccctcattagagatcagggaaggagcaatt
gatcgcctggtgaacatatataaaaatgttgtgcacaaaactggaggctatcttacagaa
aatggttatgtcaacttggagagagttcagatgataatgttggctgttggagaagttgaa
gatagcatttttaagaagcgaaaagatgatgaggaaaatttcaaaagaagacaaaaagaa
aaaagaaaaagaatgaagagggaacaacattctatgcttggtggacaatataccccacaa
ccattaggaagaggaaataggtcaagccatcagccaatcagcaatccaagacacacagcc
tatgaaatgagaatgcaggacagacaaaacactactccttcagtttctcctaattcaagc
ttcacgtctgatggtacgccatccccagcaggaggaattaagcgaaaggcagaggacagt
gacagtgaaccggagcctgaagataatgtcaggttatgggaagctggctggaaacagcgc
tattacaagaataaatttgatgttgatgtcaacgataagaagtttcgtcgtaaagttgta
cagtcttatgtggaagggctttgctgggttctccgatactattatcagggatgcgcttcc
tggaaatggtattatcctttccactatgcaccatttgcttcagattttgaagggattgca
gacatggtctcagattttgagaaaggaaccaaaccattcaaacctcttgaacaattgatg
ggagtctttccagctgccagtggtaatttcctcccaccaacatggcggaaacttatgact
gatccagactcaagtataattgatttctaccccgaagattttgctattgatctgaatggg
aaaaaatatgcttggcaaggggttgctctgttgccttttgttgatgagcgccgtctgaga
gctgctctgtcacaggtgtatcctgacctcacttctgaagaaatcagaagaaatagtctt
ggtggtgatattctttttgttgggaaacatcatcagcttcatgacttcattcttgaactg
tataagtctggtgaaaaagagccagtagacacaccccctgaactgtgtcatggaatacag
ggaaagcttaccttgaatgaaaatcccattcttccagatgagtcagtgcaatctcctgtg
ccactgctgcgtgatctgacacagaattctgccataagtatcaactttaaagatccacaa
ttccaagacgactttatttttaaggcagctgtattatcaggggcaaaaaaacctgcagca
gttctgaagccaggtgactgggagaaaactaataatgatggcagaacctggagaccacag
cttggctttaaccgtgataggaggcaagttcacttggaccagtcagcattcagaacatta
ggccatgcaatgtcaagggacagaggacaatcaggaagtggggtttacagtaatattggt
ccccctggggcttacaatcaaggaaacacgtatagaccattgctaggcaggccacagcaa
cagattcccaaactgctgtcaaatcttaggtcccaagattcctggcagggtcctacgcct
ctatttcaacaaccgccacaaagatttgacagaaattctggagctactcctcttcttgcc
tggaaccgcatgccccattcccagggttcaccataccagcaaaatcaatatcaaggtcca
gggggaccagtgaattatccacaaaggcccagtgatcggagggaacgtggaagacagggt
tatggaagaccttacccattgccaccctcttctggaagatacagctggaattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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