KEGG   Paenibacillus beijingensis: VN24_07470
Entry
VN24_07470        CDS       T03802                                 
Name
(GenBank) glycine dehydrogenase
  KO
K00283  glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj00260  Glycine, serine and threonine metabolism
pbj00630  Glyoxylate and dicarboxylate metabolism
pbj00785  Lipoic acid metabolism
pbj01100  Metabolic pathways
pbj01110  Biosynthesis of secondary metabolites
pbj01200  Carbon metabolism
Module
pbj_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VN24_07470
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VN24_07470
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    VN24_07470
Enzymes [BR:pbj01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     VN24_07470
SSDB
Motif
Pfam: GcvP2_C GDC-P Aminotran_5 Aminotran_1_2 Beta_elim_lyase
Other DBs
NCBI-ProteinID: AJY77587
UniProt: A0A0D5NRF9
Position
1652711..1654222
AA seq 503 aa
MSTTTTTITTQTSITAAAAKTDKALIFELSKPGRIAYSLPPCDVPEAAPGEYIPTAMLRK
KPAQLPEVYEVDVIRHYTELSRRNFGVDNGFYPLGSCTMKYNPKINEDTARFSGFAKIHP
YQPEESIQGALELLYTLQNDLAALTGMDQVTLQPAAGAHGEWTGLMMIRAYHESRGESRT
KVIVPDSSHGTNPASATVAGFETITIKSNERGMVDLDALRSAVGSDTAALMLTNPSTLGL
FEEQIEEIAAIVHEAGGLLYYDGANSNAIMGITRPGDMGFDVVHLNLHKTMSTPHGGGGP
GAGPVGVKSKLIPYLPKPIVSRREDGTYYFDYDRPESIGRVKAFYGNFGILVRAYTYIRT
YGPEGLRRVSECAVLNANYMMHRLAPHYEIPYPGVCKHEFVMSGRGLKKYGVRTLDVAKR
LLDFGYHPPTIYFPLNVEECIMIEPTETESKETLDGFIDTMIRIAEEARTNPEFILNAPY
NTVVKRLDETTAARKPVLNCACV
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgagtacgactacgactaccattacgactcaaacttcaattacagctgcggctgcaaaa
acggataaagcgctcatcttcgaattaagcaagcccggccgcatagcctactcgcttccg
ccctgcgacgtgccggaggcagcgccaggcgaatatattccgaccgccatgttgaggaag
aagcccgctcagctgccggaggtttatgaagtcgacgtgatccgtcattacaccgagctg
tcccgccgcaatttcggagtcgacaacggtttctatccgctagggtcctgtacgatgaag
tacaatccaaagattaatgaagatacggcccgcttcagcggcttcgccaaaatccatcct
taccagccggaagagagcatccaaggcgcgcttgagctgctgtatacgcttcagaacgac
ctggcggcgttgaccggaatggatcaggtgacgcttcagcccgctgcaggcgcgcacggt
gaatggacggggcttatgatgatccgcgcctatcatgaaagccgcggcgagagtcgcacc
aaggtcatcgttcccgactcctcgcacggaacgaatcccgccagcgccaccgtcgccggc
tttgagacgatcacgatcaagtcgaacgaacggggcatggtcgatttggatgcgctccgc
tcggcggtcggcagcgataccgctgcgcttatgctgaccaacccgagcacgcttgggttg
ttcgaggagcagatcgaagagatcgctgcaatcgtgcatgaagcgggcggacttctgtac
tatgacggcgcgaactcaaatgccatcatgggcattacgaggccaggcgatatgggcttc
gacgtcgtccacctgaatttgcacaagacgatgagcaccccgcacggcggcggaggtccc
ggagccgggccagtcggcgtaaagagcaaactaatcccttatttgccgaagccgattgtc
agccgccgggaggacggaacgtactacttcgattacgaccgccccgagtctattggccgg
gtgaaagcgttctacggcaacttcggcattctcgtacgcgcgtacacgtatatccgcacg
tacggcccggaaggacttcgccgggtatccgagtgcgccgtcctgaatgccaactatatg
atgcaccggcttgctccgcattatgaaatcccatatcccggcgtatgcaagcacgaattc
gtcatgtcgggccgcggcctgaagaaatatggcgtccggacgctcgacgtggccaaacgg
ctgctcgacttcggctaccacccgccaaccatctacttcccgcttaacgtcgaggaatgc
atcatgatcgagccgaccgagaccgagagcaaggaaacgctcgacggcttcatcgatacg
atgatccgaatcgccgaggaagcgagaacaaatccggagtttatcttgaacgctccgtac
aacacggtcgtgaaaagactcgacgaaacgacagcggcgcgcaagccggttctgaactgc
gcctgcgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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