KEGG   Paenibacillus beijingensis: VN24_10860
Entry
VN24_10860        CDS       T03802                                 
Name
(GenBank) carboxypeptidase
  KO
K21464  penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj00550  Peptidoglycan biosynthesis
pbj01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    VN24_10860
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pbj01003]
    VN24_10860
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pbj01011]
    VN24_10860
Enzymes [BR:pbj01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     VN24_10860
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     VN24_10860
Glycosyltransferases [BR:pbj01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   VN24_10860
Peptidoglycan biosynthesis and degradation proteins [BR:pbj01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   VN24_10860
SSDB
Motif
Pfam: Transgly Transpeptidase Spore_YtfJ
Other DBs
NCBI-ProteinID: AJY74991
UniProt: A0A0D5NI80
Position
complement(2410168..2412288)
AA seq 706 aa
MNKPTAKPHKPGSKNKRRRTRFALLREQLLPRSRALTRLARRLGIAAALILALTAGFLLY
LRIQSLPASSISQTSQIYDLHGSLIDTFHTGQNRKSVALADISPHLIEATVAIEDRRFYQ
HLGFDVKGMTRAALVNLEHMSTKQGASTLTQQLARNLYLTHERTWQRKLKEAVYTIQLEM
NYSKDEILGLYLNQIYYGHGAYGIEAASQMYFGKHASRLSLAESAMLAGIPKGPKYYSPY
MDMKNAKDRQKTILQAMVEGGRISQAEADEAFREVLAFKPLAADGSGGFAPYFRDYVRQI
AVDVLGIDEARLSEGGVHIYTTLDPDAQKAAEQAVKEGMPPGSEQQAALVSIDPRTGYVK
AMVGGRNYKTNQYNRALAGTRQPGSSFKPILYLTALENGMTPVTPFRSAPTVFTYDGGRK
TYQPHNYNNKYTGGFINMREAIASSDNIYAVNTVMSVGADKVIEMARKLGIDSPMRPVPS
LALGTFPVSPLEMASAFGTLAAGGVHVKPVAILRIEDSKGEVLYQAQPEAQRVVDAAHAY
VLTSMMESVFETGGTGNRVAAMIKRPIAGKTGTTSSDAWLVGYTPELATAVWVGYDKGRA
LTKAEEHRAAPIFARYTEQALAAVPPKMFPIPEGVVGVYINPASGKLASLRCSGSRLEMF
VRGTEPTEICGAAETDVSPGTSDGGSSADEAAKRSWLDHLKRWWNH
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgaacaagccgaccgccaaaccgcacaagccgggctcgaaaaacaagaggcgccgcacg
cgtttcgccttgctgcgggagcagctgctgccccgaagccgggcactaacgcgcctggcg
cgcagactcggcatcgcagcggcgctcatattggcgcttacggccggatttctgctctat
ctgcgcatccagtctctgcctgcatcttcgatcagccagacgtcacaaatatacgatctg
cacggcagcctgatcgacacgttccataccggccagaaccggaagtccgtcgcgctcgcc
gatatctcccctcatctgatcgaggcgacggtggcgatcgaggaccggcgcttctatcag
catttggggttcgacgtcaaagggatgacgcgcgccgcgctcgtcaatctggagcatatg
tcgacgaagcagggcgccagtacgctgacccagcagctcgcgcgcaatctctatttgacc
catgagcggacgtggcagcgcaagctgaaggaagcggtctatacgatccagctggaaatg
aactattccaaggacgagattctgggactgtatctgaaccagatttactacgggcacggc
gcctacggcatcgaagccgcttcgcaaatgtatttcggcaaacacgcttcccggctgtcg
ctggccgaaagcgcgatgctggccggcattccgaagggaccgaaatattactcgccttat
atggatatgaaaaatgcgaaagaccgccaaaaaacgattttgcaggcgatggttgaaggc
ggtcgtatttcgcaagcggaagcggatgaagcgttccgtgaggtgcttgcgttcaagccg
cttgcggccgacggctccggcggcttcgccccttacttccgcgattacgtgcgccagatt
gcagtcgacgtgctcggcatcgacgaggctcgcttaagcgaaggcggcgtccatatttac
acgacgctcgatccggacgcccagaaggcggcggagcaagcggtgaaggagggcatgccg
ccgggctcggagcagcaggcggcgctcgtctcgatcgacccccgcaccggatacgtcaag
gcgatggtcggaggacgcaattacaagacgaaccagtacaaccgcgctctcgccggcaca
cgccagcccggctcgtcgttcaagccgatcctctatttgaccgcgctggaaaacgggatg
actcccgtcacgccgttccggagcgcgccgaccgtctttacgtacgacggaggacgcaaa
acgtaccagcctcataattacaacaacaaatatacgggcggctttattaatatgcgcgaa
gcgatcgccagttcggacaacatttacgcggtaaacacggtgatgagcgtcggcgccgac
aaggtgatcgagatggcgcgcaagctcggcatcgacagtccgatgcggccggtgccgtcg
ctcgcgctcggcacgtttcccgtcagcccgctggagatggcgtcggcgttcggcacgctc
gccgcaggcggcgtgcatgtgaaaccggtcgcgatattgcggatcgaggacagcaaaggc
gaggtgctgtatcaggcgcagcctgaggcgcagcgggttgtcgacgcggcgcatgcgtac
gtgctgacgagcatgatggagagcgtatttgaaacgggaggcacgggcaaccgggtcgcg
gcgatgatcaagcggccgatcgccggcaagaccggcacaacgtcatccgacgcctggctc
gtcggctatacgccggagctggcaacggcggtctgggtcggctacgacaaagggcgcgcg
ctgacgaaagccgaggaacaccgcgcggccccgattttcgcccgttatacggagcaagcg
ctggcggcggtacccccgaagatgttcccgattcccgagggcgtcgtcggcgtctacatc
aaccccgcttccggcaaactggcctcgctccgctgttccggcagccggttggagatgttc
gtgcgcggaacggagccgaccgaaatatgcggagcggcggaaacggatgtcagccccggc
acttcggacggcggaagcagcgcggacgaggccgcgaagcgctcgtggctggaccacctg
aagcggtggtggaaccattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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