KEGG   Paenibacillus beijingensis: VN24_10970
Entry
VN24_10970        CDS       T03802                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj03030  DNA replication
pbj03430  Mismatch repair
pbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VN24_10970
   03430 Mismatch repair
    VN24_10970
   03440 Homologous recombination
    VN24_10970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbj03032]
    VN24_10970
   03400 DNA repair and recombination proteins [BR:pbj03400]
    VN24_10970
Enzymes [BR:pbj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VN24_10970
DNA replication proteins [BR:pbj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VN24_10970
DNA repair and recombination proteins [BR:pbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VN24_10970
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 DnaX_C AAA_30 RuvB_N AAA_5 TIP49 AAA_22 AAA_assoc_2 AAA_19 AAA_2 Mg_chelatase AAA_14 AAA_16 AAA_24 Glyco_tranf_2_5 Rad17 DNA_pol3_delta SlyX Pox_A_type_inc
Other DBs
NCBI-ProteinID: AJY75008
UniProt: A0A0D5NJA0
Position
2436346..2438166
AA seq 606 aa
MAHIALYRAWRPQTFRDMVGQQHIKQTLQNAISERRISHAYLFNGPRGTGKTSAAKIFAK
AVNCERGPAPEPCNECAACRGITAGAIMDVLEIDAASNRGIDEIREIRDNVRYAPSEVRY
KVYIIDEVHMLTSEAFNALLKTLEEPPGHVIFILATTEPHKLPATIISRCQRFDFRQVSL
EEQVQRLQDICREEDIKADDDALAYIARLSDGGMRDAISLLEQVAAFGGEGITLEGAVDA
TGGIAAEQFGQLAEAVRDRSAAAVLPLVEQLMQAGKSADKCIENLIYYFRDLLVLKLAPQ
GAGSTGRIVDAERFRAMADSFESGRLFRMIEELNRYQAELRHASQPQALFEVALLKLCTM
PAETVAAHEPGAAQRAAADPSAAAAAGATGGGAASGEVVRLQQRIDSLERRLEQLLRSGQ
APAADNGGAGASAAAAGGGSAIRSGSRGGFAQRSGGGVSRTVKLEPFLAAVGEPDTAQVR
MKWSEVLARVKDARVTVHAWLVDGEPVSVSGGTVLVAFKNTIHRETTEKQANRELIEKVL
NEAFGKPMQLATVMQKEWQAASEGAAAAPAETLELRHDDTAPARPEWVEEAIKLFGEDLV
EMKQES
NT seq 1821 nt   +upstreamnt  +downstreamnt
gtggctcacattgcgttgtaccgcgcttggcgtccgcagacgttccgggacatggtggga
caacagcatattaaacaaacgctgcaaaatgcgatcagcgagcggcgtatttcgcatgct
tacctgttcaacggtcctagggggacgggaaaaacaagcgccgccaaaatttttgccaaa
gcggttaactgcgagcggggaccggctccggaaccgtgcaacgaatgcgcggcatgccgc
ggaataacggcaggcgcgattatggatgtattggaaatcgatgcggcttccaaccggggc
attgacgaaatccgcgaaatccgcgataacgtccggtacgcgccgtcggaagtacgctat
aaagtgtatattatcgacgaggtgcacatgctgacttcagaagcgtttaacgcccttctg
aagacgctggaggaaccgcccgggcacgtgatctttattttagccacgaccgagccgcat
aagctgcccgccacgatcatctcccgctgtcagcgctttgacttccgtcaagtgtcgctg
gaggaacaggtgcagcggctgcaggacatctgccgggaggaagacatcaaagccgatgac
gatgcgcttgcttacatcgccagattgtcggacggcggcatgcgcgacgcgatcagcctg
ctggagcaggttgcggcattcggcggcgaaggcattacgctggaaggcgcggttgacgcc
accggcggcatcgcggcggaacagttcggccagcttgcggaagccgtgcgggaccgcagc
gccgccgccgtgctgccgcttgtggagcagttgatgcaggccggcaagagcgcggacaaa
tgtattgaaaatctcatttactatttccgcgatctgctcgtgcttaagctcgccccgcag
ggggcgggcagcaccgggcggatcgtcgacgccgaacgtttccgggcgatggcggattcg
ttcgaatcggggcggctgttccgcatgattgaggagcttaaccggtatcaagccgagctc
cggcatgcttcgcagccgcaagcgctgtttgaagtggcgctgctgaagctgtgcacgatg
ccggcggaaacggtcgccgcgcacgaaccgggggcggcgcaacgggcggccgcggatcct
tccgcagctgcggctgccggagctaccggaggcggagctgcttccggcgaagtcgtccgg
ctgcagcagcgcatcgactcgctggagcggcggctcgagcagctgctcagaagcggtcag
gctcccgcagccgacaacggcggagccggcgcatccgctgcggcggcaggaggcggctcc
gccatccgcagcggctcgcgtggcgggttcgcgcagcgatcgggaggcggcgtaagccgc
accgtcaagctggagccgttccttgcggctgtgggcgagccggatacggcccaggtccgc
atgaaatggagcgaagtgctcgcccgcgtcaaagacgcccgggtaacggtccatgcctgg
ctcgtggacggggagccggtatccgtatcgggcggtacggtgctggttgcgttcaaaaat
acgattcaccgcgaaacgaccgaaaagcaggcgaaccgcgaattgatcgagaaggtgctt
aacgaagcgttcggcaagccgatgcagctggcgacggtcatgcagaaggaatggcaggcc
gcctccgagggagcggccgcagcgcctgccgagacgctggagctgcggcatgacgatact
gctccggcccgccccgaatgggttgaggaagcgatcaagctgtttggcgaggatttggtg
gaaatgaaacaagaatcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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