KEGG   Paenibacillus beijingensis: VN24_17460
Entry
VN24_17460        CDS       T03802                                 
Name
(GenBank) hypothetical protein
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj02020  Two-component system
pbj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VN24_17460
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    VN24_17460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbj03021]
    VN24_17460
Transcription machinery [BR:pbj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VN24_17460
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_Crp_2 HTH_23 Sigma70_r4_2 HTH_Tnp_ISL3 HTH_IclR HTH_AsnC-type HD_5 HTH_AraC LacI HTH_21
Other DBs
NCBI-ProteinID: AJY76018
UniProt: A0A0D5NM58
Position
3868071..3869414
AA seq 447 aa
MRVRRVAVEYSLHQTQSTGLAMSREMLQGLEILQLSAFDLKDYIERQLIENPALEEQGEI
VFSFTPKVGVAAGNSFTERRVDPLDMVASRADTLEAILLEQLNCLRGLPKQIRFIARYII
GNLDDSGYLRMKADDIADILQVSITEAVQSLSLVRSFEPAGVAAEDLRDCLLLQLRHRPE
RHALAESIVTDDLDQLASGNYKVLSNKYGVSVHDIRQALEVIRSFNPRPGGFGIVEDIPY
VIPDIIIRKEAGRYVITVNDKTIPRLSANTAYKQLVKDSKITDKERRFLNEHLRSAQWLL
KCIEQRNATLLRIAEAISTLQTEFLDKGLSFLKPMAHKDIAEQVGLHESTVSRAVRSKYI
RTPGGVFELKALFSSALQALSGESASSESVRIELQKLVSGEDRVKPYSDQQLADLLMAQG
VVIARRTVAKYRKQLGIAPALQRANRR
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggtgagaagagtggccgtagaatacagcttacatcaaacccaatcgacgggactt
gcgatgagccgcgagatgcttcaaggtctggagattttacagctgtccgcatttgatctg
aaagattacatcgagcggcaactcattgaaaatccggcgcttgaggagcaaggcgaaatt
gtgttttcctttacaccgaaggttggagttgctgcaggaaactcctttacggaacggcgg
gttgatcctctggacatggtcgcttcccgagcggatacattagaggcgattttgttggaa
cagctcaattgccttcgaggacttcccaagcaaatcaggttcatagcgcgttatattatt
ggtaatttggatgacagtgggtatttgaggatgaaggcggacgatatcgctgatatcctt
caggtttcgattacggaagcagtccagagtctgtcgctggtacgcagctttgaacctgca
ggggtggcggcggaagatcttcgtgattgcttgctactacagctaagacatagaccggag
cgtcatgcgcttgcagaatcgattgttactgatgatcttgatcaattggcgagcggcaat
tataaagtattgtcgaacaaatacggcgtgtccgttcacgatattcgtcaagccctagaa
gtgatccgcagctttaatccgcgtccgggagggtttggcatagtagaggatatcccttat
gtcataccggacatcattattcgcaaagaggccggacgatacgtcattacggtcaacgat
aagaccatcccccgtctgtcggcaaatacagcgtacaagcagttagtgaaagacagcaaa
atcacggacaaggagcggcgctttttaaacgagcaccttcgctctgcccagtggctcctg
aaatgtatagagcagcgaaatgcgacactgcttcgtatagcagaggctatttccacgctc
cagactgaattcttggacaaggggctcagctttttaaaacctatggcccacaaggatatt
gctgaacaagtcggtttgcatgagtcgacggtaagccgtgcggtccggagcaaatatatt
cggacgccagggggcgtctttgaactaaaagctcttttttcatcggcgctgcaagctttg
tccggcgagtccgcttcttctgaaagcgtcagaatagagctccagaaacttgtgagcgga
gaagatcgagtaaagccttactccgatcaacagctggcggatctgctcatggcacaaggc
gttgtgatcgcaagaaggacagttgccaagtaccggaagcaactcggcattgctccggct
cttcagcgagcaaacaggaggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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