KEGG   Paenibacillus baekrokdamisoli: Back11_23960
Entry
Back11_23960      CDS       T06671                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pbk  Paenibacillus baekrokdamisoli
Pathway
pbk00740  Riboflavin metabolism
pbk01100  Metabolic pathways
pbk01110  Biosynthesis of secondary metabolites
pbk01240  Biosynthesis of cofactors
pbk02024  Quorum sensing
Module
pbk_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pbk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Back11_23960 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Back11_23960 (ribD)
Enzymes [BR:pbk01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Back11_23960 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Back11_23960 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD PALP
Other DBs
NCBI-ProteinID: BBH21051
UniProt: A0A3G9J5P0
Position
complement(2593679..2594806)
AA seq 375 aa
MFMDVLNDETYMRLAIDMASKAKGQTDINPVVGCVVVNDGRIVGLGAHLKRGEGHAEVHA
LSMAGPAAEGATVYVTLEPCSHHGRTPPCCERIIEAKAARVVVACTDPNPVVAGRGIAKL
REAGIVVEVGLLGSESEKMNEAFNTFITTRRPFVTVKSAMTLDGKIATKTGDSRYVSGPE
SREFVHTLRHQNMAIMVGAQTALADDPELTTRLQVPAVHPIRIVVDSKLRLPLDAKLLRE
RISPVIVLTTEGADANKRQALEAAGAQVLNCGSGPQVDLAEAMRLLGEQEIASILLEGGG
KLNGAMLEQSLVHKVILFIAPKIIGGAASPSSFDFEGFERMAEAIELTRMTVEQIGNDVC
IVGYPAYGDRVSGAE
NT seq 1128 nt   +upstreamnt  +downstreamnt
gtgttcatggacgtgctgaacgacgaaacatatatgcgcctagctattgatatggcaagc
aaagcgaagggtcagacggatattaatcctgttgtaggctgcgtagttgttaatgatggc
cgtatcgtgggtcttggtgcgcatcttaagcgaggtgaaggccacgctgaggttcatgca
ttgtcgatggcgggaccagcagctgagggagcgacagtatatgtgacacttgagccgtgt
agtcatcatggccgaactcctccttgctgtgaacgaatcattgaagccaaggctgcacgt
gtcgttgtcgcttgcacagacccgaatccagttgtagctggacgtggtatcgcaaagctg
cgcgaagcgggaatcgtagttgaagtcggcttgctgggttcggaatcagagaagatgaat
gaggcgtttaacacttttattacaacgagacgcccttttgttaccgttaaatcggcaatg
acgcttgatggcaaaatagccacgaaaaccggtgatagcaggtatgtcagcgggcctgag
tcacgtgaattcgtgcataccctcaggcaccaaaatatggcgatcatggttggggcacaa
accgcccttgctgatgacccagagctgacaaccagattgcaggtaccggccgttcatcct
atccgtatcgtagtggattccaagctaagacttccgctagatgctaagctgcttcgagaa
agaatctcccctgtcattgtgcttacgacagaaggagctgatgccaataagcggcaagcg
cttgaagcggcaggtgctcaagtgctgaattgcggaagcgggccgcaagttgatttggcg
gaggccatgcggctgcttggggaacaagaaattgcttccattctgcttgagggtgggggg
aaattgaacggggctatgctggagcagtcgcttgttcataaagtgatactatttatcgct
ccgaagattattggcggtgctgcatccccaagttcttttgattttgagggctttgaacga
atggctgaggcaattgagcttacaagaatgaccgtagaacagattggcaatgacgtctgt
atcgttggttatcctgcgtatggcgaccgcgtgagcggagccgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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