KEGG   Paracoccidioides lutzii Pb01: PAAG_02275
Entry
PAAG_02275        CDS       T02230                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
pbl  Paracoccidioides lutzii Pb01
Pathway
pbl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PAAG_02275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbl03041]
    PAAG_02275
Enzymes [BR:pbl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PAAG_02275
Spliceosome [BR:pbl03041]
 Complex C
  Other components
   Step II factors
    PAAG_02275
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C S1 HA2_N DEAD AAA_22 T2SSE AAA_30 nSTAND3 AAA_19 PhoH AAA_16 TsaE
Other DBs
NCBI-GeneID: 9098916
NCBI-ProteinID: XP_002795569
UniProt: C1GVJ8
Position
Unknown
AA seq 1224 aa
MDDLESLELFSLISKVTTELQNHLGVNDKTLAEFVIDQHLKCNSFAEFKSALDDIGAEFP
QSLIESIDRLVLTLHPKFKDKQKESSKATKQNGDDEVLDGIERKARVFKGLAVPDKVLQW
GDDDERAEPTSTDDANAGAMDDTFAMLEGLAGKARERKSTTKNRKRSRSPDGDEYDGGRP
RRDRYRSRSRSRSAERSHRRRDNLDEFGRSVPKHRGRDDKYNNGYSERKRRSDRDDEEFF
RRPPTPELDDQPILFKIYEGRVTGLKDFGAFVNLQGVRGKVDGLVHVSAMQDGARVNHPS
DLVSKGQPVKVKVVSIQGSRIGLSMKEVDQVTGRDLVPQRRIASGANLERLNGTGADDRY
GNLSSSVPVIEVDDGKPMKNRKRLNSPERWEIKQLIASGAVSAADYPDIDDEYHATLNGE
GEFEEEEDVDIEVRDEEPPFLAGQTKQSLELSPIRVVKAPDGSLNRAAMAGTNLAKERRE
LRQQEAQDRAAEQAAEVDLNAQWQDPMIAPEQRKFAADLRNAQVSKTTDSMPEWKRVTQS
KDQSFGKRTNMTMKQQRESLPVFKFRKQLLEAIRENQLLIVVGDTGSGKTTQLTQYLAEG
GFANDGIIGCTQPRRVAAVSVAKRVSEEVGCRLGAEVGYTIRFEDCTSPETKIKYMTDGI
LQREILLDPDLKKYSVIMLDEAHERTISTDVLFGLLKKTLKRRHDLKVIVTSATLDADRF
SEYFNMCPIFSIPGRTYPVEIMYSREPESDYLDAALVTVMQIHLTEPAGDILLFLTGQEE
IDTACEILYERMKALGPSVPELIILPVYSALPSEMQSRIFDPAPPGSRKVVIATNIAETS
ITIDQIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRSGRAGRTGPGKCFRLYTE
AAYQSEMLPTTIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALS
ALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSDEMLSIVAMLSVQSVFYRPKEKQ
QQADQKKAKFHDPHGDHLTLLNVYNAWKNSRFSNPWCFENFIQARQMRRAQDVREQLVTI
MERYKHKIVSCGRNTTKIRQALCSGFFRNAARKDPQEGYKTLIEGTPVYMHPSSALFGKA
AEHVIFHTLVLTTKEYMHCTTSIEPKWLVEAAPTFFKVAPTDRLSKRKKAQRIQPLHNRF
AGDDDWRLSSQRRQGRGGGGGTWG
NT seq 3675 nt   +upstreamnt  +downstreamnt
atggatgatcttgagtcgttggagctcttttccctcatatccaaagtaacaactgagctc
caaaaccatctcggagtgaacgacaaaacactcgccgaattcgtgatcgaccagcattta
aaatgcaactcctttgcagagttcaagagtgctctcgatgatataggcgcggagtttcct
cagagtttgattgagagtatagatcgcctggttctgacgttacacccgaagttcaaggat
aagcagaaggagtcctcaaaggccaccaagcagaatggcgacgatgaagtcttagacggg
attgaaaggaaagcgcgcgtttttaaaggtctagcggtgccggataaggtgctacaatgg
ggggacgatgatgaaagggcggaacctacgtcgacggacgatgcgaatgcgggagctatg
gatgatacctttgcgatgttggagggtttagcggggaaggcaagggaacgaaagagcacg
acgaagaataggaaaagaagtagaagcccggatggcgatgaatatgacggcggaagacca
cgaagggacagatatcgatctaggtcaaggtcgcggagcgcagaaagatcacaccgaaga
cgtgataacctggacgagttcggcagatccgtcccaaaacacaggggcagagatgacaag
tacaataatggctatagtgaaagaaagaggcggagcgatcgcgatgatgaagaattcttc
agaaggcctccgacgcctgagctcgacgatcagccaatacttttcaaaatttacgagggg
agggttacggggttaaaagactttggagcatttgtgaaccttcagggcgtcagggggaag
gttgatgggctagttcacgtctccgcgatgcaagacggtgcacgagtcaaccatccctcg
gaccttgtctcgaagggccaaccggtgaaagttaaagttgtctctatacaaggcagtcga
ataggtttatctatgaaggaagttgatcaagttactggccgtgatctcgttccccaaagg
cgaattgcttccggtgcaaatttggaacgacttaatggaactggcgcagatgaccgctac
gggaatctgagttcctcagttcccgtcattgaagttgatgatggcaagcccatgaaaaac
cgaaaacgcttaaattctcctgaaagatgggaaatcaagcaactcattgcatcgggtgct
gtatctgctgctgattatccggatatcgatgatgaatatcatgctactttgaacggggaa
ggagagtttgaggaggaggaggatgtggatattgaagtcagagatgaagagcctccgttc
ttggctggtcaaacaaaacaatctcttgaactctctcctattcgtgttgttaaggctccg
gacggctcactgaatcgtgctgcaatggctgggacaaatttggcaaaggaaagaagagag
ttacgacagcaagaggctcaagacagggctgctgagcaggctgcagaagtggatctcaac
gcccaatggcaagaccccatgatcgctcctgaacagaggaaatttgctgctgacttgcga
aatgcgcaagtatcgaaaacaaccgattctatgcctgaatggaaacgggtgacccagagc
aaggaccagtcattcgggaaaaggacaaatatgacgatgaagcagcaacgtgaaagtctt
cccgtttttaaattccgcaaacagttactggaagctattcgggaaaaccaacttctcatc
gttgtcggagacacgggttccggtaaaactacccagctaacacagtatcttgctgagggc
gggtttgcaaatgacgggatcattggttgtacccaaccccgacgtgtggctgctgtctct
gtagcaaaacgtgtgtctgaagaagttggctgtcgtttaggtgcagaagtcggttacacc
attcgatttgaagactgtactagtcctgaaaccaagatcaaatacatgacggacggtatc
cttcagagagaaattctgcttgatccagacttgaaaaaatattcagttatcatgcttgat
gaggctcacgagcggaccatcagtactgacgtattgtttggccttctcaaaaagacgctt
aaacggcgacatgatcttaaggtcatcgttacctcagccactctagatgccgatagattt
tcggaatatttcaacatgtgccccatcttctcaattcctggacgaacctaccctgtggaa
attatgtattcgagagaaccggaatccgattatttggatgcagcgttagtcaccgtgatg
cagatacatttaacggaaccagctggggatattttattgttcttgactggtcaagaagaa
atcgataccgcctgcgagattctgtatgaacgaatgaaagcgcttggacccagtgtccct
gagctaatcattttgcccgtctattctgctctgcccagtgagatgcaaagtaggattttt
gaccctgctccaccgggaagccgaaaggttgttatcgctacgaacattgcagaaacgtca
attacaattgatcaaatctactacgtggtcgacccgggatttgttaaacaaaatgcctat
gatccaaaacttgggatggattcgcttgtggttacgcccatatcacaagcacaggccaag
cagcgttcgggacgtgcaggaagaacaggcccaggtaaatgcttccgtctttacactgaa
gccgcctaccaatcagaaatgcttccaaccactatccccgaaatccaacgccagaatctc
tcgcatacaatccttatgctaaaagctatgggcatcaacgaccttctccactttgatttc
atggacccacccccaacaaacaccatgcttacagcacttgaggagctctatgctctctct
gccctagacgatgaaggtctcctgactcgacttggacgaaaaatggccgatttccccatg
gaaccggctttagcaaaagtcctaatcgcctctgttgacatgggctgttctgatgaaatg
cttagcatcgtcgccatgctttcagtccaaagtgtattctatcgacccaaggaaaagcag
caacaagcagatcaaaagaaggccaaattccacgacccgcacggcgaccacctcacactc
ttaaacgtctataacgcttggaaaaattcacgcttcagcaacccctggtgttttgagaac
ttcatacaggcacgacagatgcggcgggcacaggatgtgcgtgagcagttggtaactatc
atggagcgctacaaacataaaatagtttcttgcggacgtaacacaaccaagattcgtcag
gcgctctgctcaggattcttcaggaatgccgcacgcaaggacccgcaagaagggtataaa
acgttgatcgaaggaacacctgtttacatgcaccccagctctgcgctgtttgggaaggca
gctgagcacgtcatattccatactttggttcttacgacaaaggaatacatgcattgcact
acaagcattgaaccaaaatggctcgtcgaagcagctccaacattcttcaaagtcgctcca
actgaccggctctcaaaacgaaagaaggcacagcggatccaacccctccacaaccgattt
gcaggcgacgacgactggcgattatcatcgcaacgacggcaaggcagaggtggtggaggc
ggaacttggggatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (42)   

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