KEGG   Stutzerimonas balearica: CL52_19240
Entry
CL52_19240        CDS       T03573                                 
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pbm  Stutzerimonas balearica
Pathway
pbm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pbm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CL52_19240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbm03400]
    CL52_19240
Enzymes [BR:pbm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CL52_19240
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CL52_19240
DNA repair and recombination proteins [BR:pbm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CL52_19240
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DZR
Other DBs
NCBI-ProteinID: AJE17077
UniProt: A0A8D4C3F3
Position
complement(4077945..4078757)
AA seq 270 aa
MPELPEVETTRRGIAPHLLGQTIERVVVRDRRLRWPIPEDLDARLSGQRIEAVERRAKYL
LIRVQSGTLIAHLGMSGSLRLVPAELPAAKHEHVDILLGSGQALRYTDPRRFGALLWSEL
PLEHPLLASLGPEPLDEGFDGRRLYELSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGGISRARYERLAAEIRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
GGAFCKQCGSTLREVRLGQRASVYCGRCQR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcccgaactccccgaagtcgaaaccacccgtcgcggcatcgcgccgcatctgctcggc
cagacgatcgagcgtgtcgtcgtacgcgaccggcgcctgcgctggccgattcccgaggac
ctcgacgcgcgcctgtccggccagcgtatcgaggcggtggagcggcgcgccaagtacctg
ttgatccgggtacagagcggcacgctgatcgcccatctgggtatgtccggcagcctgcgc
ctggtgccggcggagctgccggcggccaagcacgagcacgtcgacatcctgctcggttcg
gggcaggcgctgcgctacaccgacccgcgtcgcttcggtgcgctgctctggagcgagctg
ccgctcgagcatccgctgctcgccagcctcggccccgagccgctggacgagggcttcgat
ggccgccggctgtacgagctgtcgcgcgggcgcagcatggcggtcaagccgttcatcatg
gacaacgccgtggtggtcggtgtcggcaatatctatgcgagcgaggcattgttcgccgcc
ggcatcgatccgcggcgcccggcaggcggcatttcgcgggcgcgctacgagcgcctggcc
gctgagatcaggcgcatcctggccatggccatcgagcgcggcggcacgacgctgcgcgac
ttcgtcggcggcgacggcaagcccggctacttccagcaggagctgttcgtctacggacgt
ggcggtgcgttctgcaagcagtgcggcagtacgctgcgcgaggtccgtctcggccagcgc
gccagtgtctactgcggtcgctgccagcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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