KEGG   Paracoccidioides brasiliensis: PADG_02988
Entry
PADG_02988        CDS       T03549                                 
Name
(RefSeq) exosome catalytic subunit DIS3
  KO
K12585  exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PADG_02988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbn03019]
    PADG_02988
Messenger RNA biogenesis [BR:pbn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     PADG_02988
SSDB
Motif
Pfam: RNB Rrp44_CSD1 Rrp44_S1 OB_Dis3 PIN_4 CSD2
Other DBs
NCBI-GeneID: 22582371
NCBI-ProteinID: XP_010758674
UniProt: C1G733
Position
Unknown
AA seq 1037 aa
MKSLKRDHSSNPLAANVSSKIFVRSTKSGKAQKIVRELYLRQDIPCSSKLCSVCLSYAPT
DANGNVTPFVLSERPAGTKSFPRGHYLMPDTNALLNGMDLFEQTGSFYDVIILQTVLEEL
KNQSLALYNRLISLIRSEEKRYYLFFNEFRLETHVRRRAVESINDRNDRAVRTAAKWYEE
HLRNAVKRSNIEQTAPDIVVITDDKDNLRKGEQEGVTAMSLSDYVSGLEDSNRLLDMINE
AKSAHSSRATRGQLFYPEYYSISKMMTGLRAGTLHQGVFKVSPYNYLEGSVQVAAFEKSL
LILGRDNSNRAISGDIVVVEVLPKDQWKAPSTKIVDEETVTKDENAEYEEKEAVVTEKER
RALQVEVRKAHVKTTEGRPQPTARVVGIVKRNWRQYVGNIDKISTAAQAQPGRRQQTVFV
IPMDKRIPKIRIRTRQAQELFGQRILVTVDAWDRDSRYPTGHFVRSLGELETKGAETEAL
LLEYDVQYRPFPQIVLDCLPPEGHNWKVPQNMDDPGWHDRKDLRELLVCSIDPPGCQDID
DALHARPLPNGNIEVGVHIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTD
LCSLKPHVQRYAFSTIWEMTPSAEVVSSSCTKSVIFSREAFSYEQAQLRIDDISKTDELT
ESMRTLSKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLETNSLVEEF
MLLANITVASKIFKAFPKTAMLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALATSL
DRCVDPANPFFNTLIRILATRCMTSAEYFCAGAHAESEFRHYGLASPIYTHFTSPIRRYA
DLVVHRQLAAAIGYEGPGASAAEGLATRGRLEDICKNINHRHRNAQFAGRASIEYYVGQA
LKARGEQEASKLGEGEGTNAGVDEEGYVMRVFDNGVVVFVPRFGIEGVVRLEDFIIPGST
QGDGKHVAARRESEFHVEDYSLEVWEKEGENGTGGDAKKSVVVNLFDRVKVNVSSVKEEG
GRGAGKRRVRVLILGQV
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgaaaagtttaaagagggatcactcttcaaacccgctcgccgccaatgtctcaagcaaa
atcttcgtcaggtcaactaaaagcgggaaggcccagaagattgtacgggaactataccta
cgacaagacataccatgctcctcgaagctatgttctgtgtgcttgtcatacgcaccaact
gacgccaatggaaatgttactccgtttgtgctatctgagcggcccgctggcacgaaatca
tttcctcgaggccattacttaatgccagatacgaatgcgcttcttaatggtatggacctt
ttcgaacagacaggttctttttatgatgtgattattttgcagacagtgctggaggagttg
aagaaccagtctctagctctatataaccgactgatttccctaattcggagcgaagaaaaa
cggtattacctatttttcaatgaattccgattagagacccatgtcaggagaagagctgtg
gaaagcattaacgatcgaaatgatcgggccgttcgaacagcagcaaaatggtatgaggaa
catcttcgcaatgcggtgaagagaagcaatatagagcagactgccccggacatagttgtc
ataaccgacgataaggataatcttcgtaaaggagaacaggagggagttacggccatgtcg
ttatctgattatgtttctggccttgaggattccaatagactgcttgacatgatcaacgaa
gctaagtctgcgcacagttccagggcaaccaggggccaactgttttaccctgagtattac
tctatatctaagatgatgactggtcttcgcgctggaactctgcaccagggagttttcaaa
gtttccccctataattacctcgagggatcagtacaggtggcagcttttgaaaaatctctc
cttattcttggtcgagataacagtaatcgagctatatcaggggatatagtagtggtggaa
gttcttccaaaggaccagtggaaggctccatcgacaaaaatcgtggatgaggaaacggtc
accaaagatgaaaatgccgaatatgaggaaaaggaagccgtggtgacggaaaaggagagg
agagccctacaggtggaggttcgcaaagcgcacgtaaagactacggagggtcgacctcaa
ccaacagctcgggtggttgggatagtgaaaaggaattggcgccagtatgtgggaaatatc
gacaagatatctacagccgctcaagctcagcctggtaggcgacagcaaactgtgtttgtc
attcccatggataagcgaatacccaaaattcggatacgaacaagacaagcacaggaactt
tttggccaaagaatcctagttacggtcgatgcctgggatcgcgattctaggtacccaacg
ggccattttgtacggtctctgggagaattggaaaccaaaggggccgaaactgaagcgcta
cttctcgagtatgatgttcaatatagaccgttcccgcagattgtgcttgactgtcttcct
ccagaaggtcataactggaaggttccacaaaatatggatgatcctggatggcatgatcgc
aaagacttacgggagttacttgtctgtagtattgaccctccgggctgtcaggatatcgat
gatgctctccatgctcgccctctgcctaatggaaatattgaagtcggtgtccatattgcc
gatgtgtcccatttcgtgaagccaaatacacctatggataccgaagctagtatgagaggg
acaacggtatatcttgtagacaaacgtatcgatatgttacctatgcttctgggaacggac
ctatgctctttaaagccgcatgttcagcgctatgccttctcaactatctgggaaatgaca
ccttccgccgaggtcgtatcgtcatcctgtaccaagtctgtcatcttctctagggaagct
ttcagttacgaacaggcccagttacgcatcgatgacatatcgaaaactgacgaattaaca
gagagcatgagaacactttcgaagctgtcgaaattgctcaaacaaaagcgaatggatgca
ggagcacttaacttagcgtctccggaagtccgcattgaaaccgattcggaattatctgat
cccgtggcagacgttaaaaccaaagccctcttagaaaccaacagcttagtcgaggaattt
atgcttctcgcaaacatcactgtggcttccaaaattttcaaggcattccccaaaaccgcc
atgcttcgacgccacgctactccaccaccttcaaatttcgaagaattaattgcccaactc
tctaaaaagcgcaatatgacccttgatgtatccagctcccttgctctagcaacttctctt
gaccgctgtgtcgaccctgccaaccctttcttcaacactcttattcgtatcctagcgact
agatgcatgacttcagctgaatatttctgtgcaggagcccacgcggaatctgaattccgc
cactacggccttgcctcaccaatttacacccatttcacttctcccattcggcgatacgcg
gatttggtcgtccaccgccaattagctgccgcgataggctacgaaggtcctggtgcctct
gccgcagaaggtctagctaccaggggccgactggaagatatttgcaaaaatatcaaccat
cgccaccgtaacgcacagtttgctggtcgtgcaagcattgaatactatgtcgggcaggcg
ctcaaggcacgtggggaacaggaggcgtctaaacttggggagggcgagggtacgaatgcg
ggagtagatgaggaaggatatgtcatgcgagttttcgataacggtgttgttgttttcgtg
ccacgatttggcattgagggtgttgtgaggttagaagatttcattattcccggaagcacc
cagggggacgggaaacacgttgcggcaaggcgggagagtgaatttcatgtagaggattat
tcattagaggtttgggagaaggaaggggagaatggaactggtggggatgcgaagaagagt
gtggtggtcaacttgtttgatagagtcaaggttaatgttagctctgtgaaggaggaaggg
ggccgtggtgctggaaagaggagagtgagagtattgattttgggccaggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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