KEGG   Acidipropionibacterium acidipropionici ATCC 4875: PACID_12800
Entry
PACID_12800       CDS       T02345                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pbo  Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00300  Lysine biosynthesis
pbo00550  Peptidoglycan biosynthesis
pbo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pbo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PACID_12800
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PACID_12800
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pbo01011]
    PACID_12800
Enzymes [BR:pbo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     PACID_12800
Peptidoglycan biosynthesis and degradation proteins [BR:pbo01011]
 Precursor biosynthesis
  Amino acid ligase
   PACID_12800
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase PE LpxD DUF1611
Other DBs
NCBI-ProteinID: AFV89102
UniProt: K7S3C6
Position
1397753..1399342
AA seq 529 aa
MSPDTSHLLRPATVGTTPWEQLEEVLGHPRIHGELPGRGVRGITLDSRQVSAGDLYVGLP
GTRFHGASFAAAAVAAGACAVLTDPRGEALIDDQGVPVLVVADPRVAMARASALIFGEPT
RRMTMYGITGTNGKTTTAFLVEAGLRAAGLRAGTIGTIGYRLDGRPLPSARTTITTPEAP
DLQALFATMADAGATDTVMEVSSHALAMHRVDGTRFDVAAFTNLGRDHLDYHKTMEAYFQ
AKARLFTPELTRAAVVNVDDEYGRRLAEIIRAEDGVELITTSVDAASDYRVASWQARGGL
GSIVQVETPSGLRELPLSLPGEFNVRNAVMALAMLKRAGHGFDDVAPGLAQAQVPGRMER
VDIGPGAPEVLVDFAHTPQAIGSALAAARTATAGRLIAVLGAGGDRDSAKRGPMGGVAAE
HADVVVVTDDNPRTEDPQTIRAAVLAGARERGGAEVVDGGDRRTAIREALAMAGDTDLVA
VLGKGHETGQLVGDRVLEFDDRVVTGQEWARLHGSPGPAQAQDGEDITA
NT seq 1590 nt   +upstreamnt  +downstreamnt
gtgagccctgacacctctcatctgttgcgtcctgccaccgtggggacgacgccatgggag
cagctggaggaggtgctcggccatccgaggatccacggcgagctgcccggccggggagtc
cgcggcatcaccctggactctcgtcaggtgagcgccggagatctctacgtcggccttccc
ggcacccgtttccacggcgcctcattcgcagccgcggccgtcgccgcgggagcctgcgcg
gtgctcaccgacccccgcggggaggccctgatcgacgaccagggggtccccgtgctggtg
gtggccgatcccagggtcgcgatggccagggcctcggccctcatcttcggggagccgacc
cgccgcatgacgatgtacggcatcaccggcaccaacgggaagacgacgaccgccttcctg
gtggaggcggggctgcgtgccgcgggcctgcgagcgggcaccatcggcaccatcggctac
cggctcgacggacggccgctgcccagcgcccggaccaccatcacgaccccggaggcgccc
gacctgcaggccctcttcgccacgatggccgacgccggggcgaccgacaccgtcatggag
gtgtcctcccacgcactggccatgcaccgggtcgacggcaccaggttcgacgtcgccgct
ttcaccaacctggggcgcgaccacctcgactaccacaagaccatggaggcctacttccag
gccaaggccagactcttcacccccgagctcacccgggccgccgtcgtcaacgtcgacgac
gagtacgggcgaaggctcgccgagatcatccgggccgaggacggggtggaactcatcacc
acctccgtcgacgccgcctcggactaccgggtcgcatcctggcaggcccggggcgggctg
ggcagcatcgtgcaggtcgagaccccctcggggctccgcgagctgcccctcagccttccg
ggcgagttcaacgtccgtaacgccgtgatggccctggcgatgctcaagcgggccggtcac
ggcttcgacgacgtcgccccgggcctggcgcaggcccaggtgcccggccggatggagcgg
gtcgacatcggaccgggggccccggaggtcctggtcgacttcgcccacaccccccaggcc
atcggatctgccctggcggcggcgcgcaccgccaccgccggacgactcatcgcggtcctg
ggagccgggggagaccgcgactccgccaagcgcggcccgatgggcggcgtcgccgccgaa
catgccgacgtcgtggtggtcaccgacgacaacccgcgcaccgaggacccgcagaccatt
cgcgcggccgtgctggccggggcccgcgagaggggcggcgccgaagtggtcgacggcggc
gatcgcagaacagcgatccgcgaggccctggcgatggccggcgacaccgacctggtggcc
gtcctcggcaagggacacgagaccggccagctggtgggcgaccgggtgctcgaattcgac
gacagggtcgtgaccggtcaggaatgggcccggctgcacggctcaccggggcccgctcag
gcccaggacggggaggacatcaccgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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