KEGG   Acidipropionibacterium acidipropionici ATCC 4875: PACID_20070
Entry
PACID_20070       CDS       T02345                                 
Name
(GenBank) Exonuclease V, alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
pbo  Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PACID_20070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbo03400]
    PACID_20070
Enzymes [BR:pbo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PACID_20070
DNA repair and recombination proteins [BR:pbo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PACID_20070
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 AAA_11 AAA_22 Helicase_RecD SH3_13 UvrD-helicase PhoH SLFN-g3_helicase nSTAND3 UvrD_C AAA_25 AAA_16 CbiA
Other DBs
NCBI-ProteinID: AFV89802
UniProt: K7S5A9
Position
2134211..2136139
AA seq 642 aa
MPDLIPVAAGHLAPFCRTGVLEAADVHLARLICRAGGEPSPDVELAAALTVRELRLGSVQ
MDPATIRRDVARQILDPAVVAAAGPGELAALEEFKALSWPDPSAWLEELGVSPAVAGPMA
PANRRALRLDEGILHLERYWQDEQQVAQLMAGLADDPPDELSDHLVEAAVKSVGGALRQA
GTVLDPAQIQAAERACRHRLTVLAGGPGTGKTTTVCTILAVLARAAGDPGPVRLAAPSGK
AAARLRDAVGQVAAGLPEEFRPASVEATTVHALLGSRGPGRGFSHDARNPLAAGVVIVDE
ASMLSLPMAARLLEAVGPSTRLVLVGDPGQLVSVDAGSVLADVVASASGLGPERLPVTTL
TSNHRSGGAIARLAEAVRRGDQDAVMAVLDGDDSTVGFIDADAAGVGLQDLPEVAEQIRS
VAADTLEAVNRGDDEEALRLVDEHRLLCAHRQGPYGVEAWSRQMDSALSEALPGLGRGRW
VVGEPVIVNRNMRQLEINNGDCGVVVTEDPVPTVVLPGGSGAPRRLPCALVASLRPLQAM
TVHKAQGSQFNRVTVILPPPDSPLLTRELIYTAITRARRGLTVVGTRESVSRAVAQPSRR
RSGLARLWERRSQRDRQVGAGLGDGQAVGEPGLDEAAGDGHR
NT seq 1929 nt   +upstreamnt  +downstreamnt
gtgcctgatctcatcccggtggcagctggacatctggcccccttctgccgcaccggcgtg
ctggaggccgccgatgtccacctggcccgactcatctgccgggccggcggggagccctcc
cccgacgtcgagctcgccgccgccctgaccgtcagggagctgcgactcggatctgtccag
atggatccggcgaccatccgccgggacgtcgcccgtcagatcctcgacccggccgtggtg
gccgccgccggccccggggagctggccgccctcgaagagttcaaggccctgtcgtggccc
gatccgtccgcctggctcgaggaactgggggtcagcccggcggttgcgggcccgatggcc
ccggccaaccggcgggccctgcgactcgacgagggcatcctccacctcgagcggtactgg
caggacgagcagcaggtggcccagctgatggccggcctggcggacgaccctcccgacgag
ctctccgatcacctcgtcgaggccgccgtcaaatcggtgggtggcgccctgaggcaggcc
ggcaccgttctggaccccgcccagatccaggccgcggagcgggcctgccggcaccgcctc
accgtcctggcgggaggaccgggcaccgggaagacgaccacggtctgcacgatcctcgcg
gtgctcgcccgggcggccggcgatccggggccggtccggctggcggctcccagcggaaag
gccgcagccaggctgcgagacgccgtcggccaggtggcggccggcctgcccgaggaattc
cggcctgcctccgtcgaggccaccacggtgcatgcgctcctcgggtcccgggggcccggc
agaggcttcagccacgacgcccgcaaccccctggcggccggggtggtgatcgtcgacgag
gcgtcgatgctgtccctgccgatggccgcccggctgttggaggccgtcggcccctcgacc
aggctggtgctggtcggcgatcccggccagctcgtctcggtggacgccggcagcgtcctg
gccgacgtcgtcgcctccgcctcgggtctgggccccgagcggctgccggtcaccaccctc
accagcaatcaccgctccggcggcgccatcgcccggctcgccgaggcggtgcgccgcggg
gaccaggatgcggtgatggccgtgctcgacggcgacgactcgacggtgggattcatcgac
gcggatgcggccggcgtcgggctgcaggatcttcccgaggtggccgagcagatccggtcg
gtggccgccgacaccctcgaggcggtgaaccgcggcgacgacgaggaggccctgaggctg
gtggacgagcaccggctgctgtgcgcccaccgtcaggggccctacggggtcgaggcgtgg
tcccgacagatggactccgccctgtcggaggccctgcccgggctgggccggggccgctgg
gtggtcggcgagccggtcatcgtcaaccggaatatgcgccagctggagatcaacaacggc
gactgcggggtcgtggtgaccgaggatccggtgcccaccgtcgttctgccgggcggctcg
ggtgccccgcggcgactgccctgcgccctggtggcgtcgctgcgtccccttcaggcgatg
accgtccacaaggctcagggctcccagttcaaccgtgtgacggtgatcctgccccctccc
gactcgccgctgctgacccgggagctgatctacaccgccatcacccgggccagacgcggc
ctgacggtggtgggcacccgcgagtcggtgagccgtgcggtggcccagccgtcccgacga
cgctcagggctggcccggctctgggagcgccgctcccagcgggaccgacaggtcggcgcc
ggactcggggacgggcaggcggtcggcgagccaggcctcgatgaggctgcgggcgatgga
catcggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system