KEGG   Acidipropionibacterium acidipropionici ATCC 4875: PACID_24670
Entry
PACID_24670       CDS       T02345                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pbo  Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo00740  Riboflavin metabolism
pbo01100  Metabolic pathways
pbo01110  Biosynthesis of secondary metabolites
pbo01240  Biosynthesis of cofactors
pbo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pbo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PACID_24670 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PACID_24670 (ribD)
Enzymes [BR:pbo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PACID_24670 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PACID_24670 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AFV90243
UniProt: K7RYZ7
Position
complement(2605611..2606774)
AA seq 387 aa
MDHEDASSDALGEQRDSEGRAERESVRRAERDAMERALELAALGPVPDPNPRVGCVLIDE
RGRVVGQGHHHGAGTPHAEIEALRSLARPASGLTAVVTLEPCNHTGRTGPCSQALIEAGI
SRVVIGQDDPNPQAAGGGVALEEAGIQVVRGVLRDRAAALNQDWDFAVRHGRPKVVWKYA
ATLDGRSAAADGTSRWITSSLARAQVHRERARCGALVIGTGTALADDPRLTVRGIDIPHQ
PLRVVVGHRELPSSMQVFSDEAPTLQLREHDPAAVLAELDRRGIRRVWLEGGPTLAGAFW
RAGLIDEVVAHLTPKLLGSGAPALGDAGVSTIGEAHRLVIDEVSMLGPDLCVRAHPDPGT
RPDPGTRLDPGTRLDPQCGAQGRGSHE
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggatcacgaggacgcatcgagcgatgccctgggcgaacagcgcgactctgaagggcgc
gcggagcgtgagtcggtcaggcgcgcggagcgcgacgccatggagcgggccctcgaactg
gccgcgctcggaccggtacccgatccgaacccaagagtcgggtgcgtcctcatcgatgag
cgcggccgtgtcgtcggccagggccaccatcacggcgccggcaccccgcacgccgagatc
gaggcactgcgcagtcttgcccggccggcctccgggctgaccgcggtcgtgacactggag
ccctgcaatcacacaggtcgcaccgggccctgctcacaggcgctcatcgaggccgggatc
tcacgggtggtgatcggtcaggacgatcccaacccccaggcggccggaggcggcgtggcc
ctggaggaggccgggatccaggtggtgcgcggtgtgctccgcgatcgggccgccgcgctc
aatcaggactgggacttcgccgtgcggcacggccggcccaaggtggtgtggaaatacgcc
gccaccctcgacggccggtccgcggccgccgacggcaccagccggtggatcacatcatcc
ctggcgcgcgcccaggtgcaccgtgaacgggcccggtgcggagccctggtgatcggcacc
ggaaccgccctggccgatgacccccggttgacggtccggggcatcgacatcccgcaccag
ccactgcgggtcgtggtggggcatcgggagctgcccagcagcatgcaggtgttctcggac
gaggcccccaccctgcagctgcgcgagcacgatccggccgcagtgctggccgaactggac
cgtcgcgggatccgccgcgtgtggctggagggaggaccgaccctggctggggccttctgg
cgtgccggcctcatcgacgaggtggtggcgcacctgacgcccaagctgctcggatccggg
gcccctgcactgggcgatgcaggggtctcgaccatcggcgaggcccatcgtctggtgatc
gacgaggtctcgatgctcggccccgacctctgcgtgcgcgcgcaccccgatcccggcacc
cgccctgaccctggcacccgcctcgaccctggcacccgactcgatccccaatgtggcgca
caggggcgtgggagtcatgaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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