KEGG   Parvularcula bermudensis: PB2503_05717
Entry
PB2503_05717      CDS       T01298                                 
Name
(GenBank) possible conjugal transfer protein trbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
pbr  Parvularcula bermudensis
Pathway
pbr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pbr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PB2503_05717
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbr02044]
    PB2503_05717
Secretion system [BR:pbr02044]
 Type IV secretion system
  Trb secretion system protein
   PB2503_05717
SSDB
Motif
Pfam: DUF948 DUF4141 FUSC DUF3450 TMF_TATA_bd Syntaxin Laminin_II Transcrip_act DUF745 BLOC1_2 MLKL_N Muted DUF1664 DUF3598_N DASH_Dad3 EXOC6_Sec15_N
Other DBs
NCBI-ProteinID: ADM09215
UniProt: E0TGX5
Position
1093286..1093984
AA seq 232 aa
MKRLFISAALCALPLSVITAPPAAAQWTVYDPANHIQNIYQAVRALQEINNQIQQLTHEI
EMLENMARDLEALPDSIADDILRRMRRIEELMREAEGIGYRVEEIEREYEEVYPEDYGAE
PPRQAVLVEEARARWRQSRTAYRESLEVTASVVSSAREDSESLDRLIADSQSAVGNLQVA
QAGNQIEALQTEQLMQMEAMMAAHYRAEALERARQLAEAERGRARTRAFLGE
NT seq 699 nt   +upstreamnt  +downstreamnt
atgaaacgccttttcatttcagccgccctttgcgccttgcccctgtctgtgatcaccgca
ccgcccgctgcagcccaatggacggtctatgacccggccaatcacatccagaacatctat
caggcggtgcgcgcgctgcaggagatcaacaatcagatccagcagctcacccatgaaatc
gaaatgctggagaatatggcgcgcgatctcgaagcgctgccggacagcatcgccgacgac
attttgcgccgtatgcggcgcattgaggagctgatgcgcgaggccgaagggatcggatac
cgcgtcgaggaaatcgagcgcgagtatgaagaggtgtacccggaagactatggagccgag
ccgccgcgtcaggccgtgctcgtcgaagaggcccgcgcccgctggcgtcagtcccgcacg
gcttatcgcgaaagccttgaggtcacggcctccgtcgtttcatcggcacgggaagactct
gaaagtctcgaccggctgatcgccgacagccagtccgccgttggcaatctccaggtggct
caagcgggcaaccagatcgaggcgttgcagaccgagcagctcatgcagatggaagccatg
atggccgcccattaccgcgccgaagcactggagcgcgcccggcagctcgccgaagccgaa
cgcggccgcgcccgcacacgggccttcctcggagagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (42)   

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