KEGG   Pectobacterium brasiliense: B5S52_00020
Entry
B5S52_00020       CDS       T06364                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pbra  Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbra03032]
    B5S52_00020
   03400 DNA repair and recombination proteins [BR:pbra03400]
    B5S52_00020
Enzymes [BR:pbra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B5S52_00020
DNA replication proteins [BR:pbra03032]
 Prokaryotic type
  DNA Topoisomerases
   B5S52_00020
DNA repair and recombination proteins [BR:pbra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B5S52_00020
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim GyrB_hook HATPase_c HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: ARA74361
Position
3657..6074
AA seq 805 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
ITIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLKLVIHRDGKLHEQTYKHGVAQAPLAVTGETNRTGTTVRFWPSHETFTNVV
EFEYEILAKRLRELSFLNSGVSIRLIDEREKDKADHYHYDGGIKAFVDYLNRNKTPIHPN
VFYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNTYMDK
EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVESLMNEKLVD
YLMENPSDAKIVVGKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQLPEIVERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDLYQIALALDGATLHTNAQAPALAGEPLEKLVSEHYAVQKMIGRMER
RFPRAFLNRLIYQPTLAEADLGEREKVQAWAESLVSSLNENEIHGSTYSFVIHHDEERSV
FEPALRVRTHGVDTDYPLGAGFVAGSEYRKLNQLGEKLRGLIEEDAYIERGERRQPVASF
EQALEWLVKESRRGLTVQRYKGLGEMNPDQLWETTMDPTSRRMLRVTVKDAIAADELFTT
LMGDAVEPRRAFIEENALKAMNIDI
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtcgaattcttatgactcctcaagtatcaaggtattgaaagggctggatgcggtacgt
aaacgcccaggtatgtatatcggcgatacggacgacggtaccggcctgcatcacatggta
ttcgaggttgtggacaacgctatcgacgaagcactcgctggctattgtaaagacattatc
atcaccatccatgctgataactcggtatcggtgcaggatgatggccgtggtattccgacc
ggcattcacgaagaagaaggtatctccgcggctgaagtcatcatgaccgtgctgcacgcg
ggcggtaagttcgatgataactcgtataaagtctctggcggtctgcacggcgtaggggtt
tccgtggttaacgccctgtcggaaaaactgaaactggttatccaccgcgacgggaaactt
cacgagcaaacctataaacacggcgtggcgcaggctccgctggctgttacgggtgaaacc
aacagaaccggtacgacggtgcgcttctggccgagccatgagacgttcaccaacgtggtg
gaattcgagtatgagattctggccaagcgtctgcgcgagctgtcgttcctgaactccggt
gtctccatccgcttgatcgacgagcgtgagaaagataaagccgatcattaccattatgac
ggcggcatcaaggcgtttgttgattacctgaaccgtaacaagacgccaattcacccgaac
gtgttttatttctcgacggtgaaagatgacatcggcgtggaagtggcattgcagtggaac
gacggtttccaggaaaacatttactgctttaccaacaacattccacagcgtgacggtggt
acgcacctggccggtttccgtgccgcgatgacccgtacgctgaatacctacatggataaa
gaaggctacagcaagaaagccaaagtcagcgctactggtgacgatgcgcgtgaagggctg
attgccgtggtttccgtgaaagtgccggatccgaaattctcctcgcagaccaaagacaag
ctggtttcttccgaagtgaaaacggcggttgaatcgctgatgaacgagaagctggtggat
tatctgatggaaaatccgtcagacgccaaaatcgtggtcggtaaaattattgatgccgca
cgtgcccgtgaagcggcgcgtaaagcgcgtgatatgacgcgtcgtaaaggtgcgctcgat
ctggctggcctgccgggcaaactggcggactgtcaggaacgtgaccccgcgctgtctgaa
ctgtacctggtggaaggggactcagcgggcggctctgccaagcaggggcgtaaccgtaag
aaccaggcgattctgccgctgaaaggtaaaatcctgaacgttgagaaagcccgttttgac
aagatgctttcctcacaggaagtcgcgacgctgatcaccgcgctgggttgcggcattggc
cgtgatgaatataacccggacaaactgcgctaccacaacatcatcatcatgaccgatgct
gacgtggatggttcgcacatccgtactctgctgttgaccttcttctatcgtcaactgcct
gaaatcgttgagcgtggtcacgtgtatattgctcagccgcctctgtacaaggtgaaaaaa
ggcaagcaggaacagtacatcaaagatgatgaagcgatggacctgtaccagatcgcactg
gcgctagacggcgcgacgctgcacaccaatgcacaggctcctgcgctggcgggtgaaccg
ctggagaaactggtttctgaacattacgccgtacagaagatgattggccgtatggagcgt
cgcttcccgcgtgcgttcttgaaccgcctgatctatcaaccaacgttggctgaagccgat
ttgggcgagcgtgaaaaagtacaggcgtgggcggaatcgctggttagcagcctgaacgaa
aacgagattcacggcagcacatacagctttgtgattcatcatgatgaagagcgcagcgta
tttgaaccggcgctgcgcgtgcgtacgcacggtgtggataccgattatccgctgggcgca
ggcttcgtggcgggcagcgaataccgcaaattgaatcagctgggcgaaaaactgcgcggc
ctgattgaagaagatgcgtacatcgaacgtggcgagcgtcgtcagccagttgccagcttt
gaacaggcgctggagtggctggtgaaagaatcccgccgtggcctgaccgtacagcgctat
aaaggtctgggtgaaatgaacccggatcagctgtgggaaaccacgatggatccgaccagt
cgccgcatgctgcgcgtgacggtgaaagacgccattgctgccgatgagctgttcaccacg
ctgatgggcgatgcggttgaaccgcgtcgtgcatttatcgaagagaacgccctgaaagcg
atgaatatcgatatctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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