KEGG   Pectobacterium brasiliense: B5S52_01330
Entry
B5S52_01330       CDS       T06364                                 
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pbra  Pectobacterium brasiliense
Pathway
pbra03420  Nucleotide excision repair
pbra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B5S52_01330
   03430 Mismatch repair
    B5S52_01330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbra03400]
    B5S52_01330
Enzymes [BR:pbra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B5S52_01330
DNA repair and recombination proteins [BR:pbra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B5S52_01330
   MMR (mismatch excision repair)
    Other MMR factors
     B5S52_01330
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 PhoH
Other DBs
NCBI-ProteinID: ARA74595
UniProt: A0A094TV23
Position
292656..294818
AA seq 720 aa
MDVSDLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARYVVNRIKTWHENGGALKDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKVLAGRAAASLQRFIELIDALAYETSELPLHIQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttctgatctgctcgatggcctcaacgacaaacagcgtgatgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggggcaggcagcggcaaaactcgggtactggtt
catcgcattgcctggctcttgtccgtcgaaaactgttcgccgtattccattatggcggtg
acgtttaccaacaaagcggcggcggagatgcgccatcgtatcgatcacttgatcggcacc
agccagggcggcatgtggattggcactttccacgggctggcacaccgcctgctgcgtgcg
caccatatggatgccaatctgccgcaggatttccagattctggacagcgaagatcagctg
cgtctgctgaagcgtctgattcgggctctcaacctggatgagaaacagtggccgccgcgt
caggcgatgtggttcatcaacgggaagaaagatgaggggctgcgcccgcagcacattgaa
agctacggcaaccctatcgagcaaacgtggcagcgcgtgtatcaggcctatcaggaagcg
tgcgatcgtgccgggctggtggatttcgccgagctgctgctgcgcgcgcatgaactgtgg
ctgaacaagccgcatgtgctgaaccactatcgcgaacggtttaccaacattctggtggac
gaattccaggataccaaccgcattcagtacgcctggatccgtatgctggcgggcgacagc
gccaaggtgatgatcgtcggggatgacgatcagtcgatttacggctggcgtggggcgcag
gtagaaaacattcagctgttcctgaaagatttcgctggtgcagaaacgatccgtctggag
cagaactaccgttcgaccagcaacatcctgaaagcggcgaatgcgctcatcgcgcataac
ggcgggcggctcggaaaaaacctgtggactgatggcgtagagggcgaacctatctcgctg
tattgcgcgttcaacgaattggatgaagcgcgctacgtcgttaatcggattaaaacctgg
catgaaaatggcggtgcgctgaaggataacgccattctgtatcggagtaacgcccagtcg
cgggtgctggaagaggcgctgttacagcagagtatgccgtaccgcatctacggcggcatg
cgcttcttcgaacgtcaggaaattaaagatgcgctgtcttatctgcgcctgatcgctaat
cgtaacgatgatgcggcgttcgagcgtgtggtgaatacgccgacgcgcggcattggcgat
cgcacgctggacgtggtgcgtcagacggcgcgcgatcgtcagcttacgctgtggcaatcc
acgcgggcgctgttgcaggagaaagtgctggctgggcgagcggcggcatcgctacagcgc
tttatcgaactgatcgatgcgctggcctatgaaacgtctgagctaccattgcatattcaa
accgaccgggcgattaaggattccggcctgtggagcatgtacgaacaggaaaaaggcgag
aaagggcaggcgcgggtagaaaacctggaagaactggtgacggcgacgcgccagttcagc
tatcaggaagaagatcaggatttgatgccgcttcaggccttcctgtcgcatgccgcgctg
gaagcgggcgaaggtcaggcggatgccaatcaggatgcggttcagcttatgacgctgcac
tcggcgaaagggctggagttcccgcaggtgtttatcgtcggtatggaagaagggatgttc
cctagccagatgtcgctggatgaaggtggacgtctggaagaagagcgtcgtctggcttat
gtcggcgtcacgcgcgcgatggaaaagctaacgataacctacgcggaatcccgccgttta
tacggcaaagaagcctatcaccggccttcccgattcgtcggcgagctgccggaagagtgt
gttgaagaagtgcggttgcgcgccagcgtctcccgtccggttaatcatcagcgcctcggc
acgccgataacgcagaacgacagcggctacaaattaggacagcgggttcgtcacgccaag
tttggtgaaggtacgatcgtaaatctggaaggcagcggcgatcacgcccgccttcaggtc
gcgtttcaagggcaaggcattaaatggctggttgccgcttatgccagactggaaacggtg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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