KEGG   Pectobacterium brasiliense: B5S52_01675
Entry
B5S52_01675       CDS       T06364                                 
Name
(GenBank) decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pbra  Pectobacterium brasiliense
Pathway
pbra00300  Lysine biosynthesis
pbra00470  D-Amino acid metabolism
pbra01100  Metabolic pathways
pbra01110  Biosynthesis of secondary metabolites
pbra01120  Microbial metabolism in diverse environments
pbra01230  Biosynthesis of amino acids
Module
pbra_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    B5S52_01675
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B5S52_01675
Enzymes [BR:pbra01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     B5S52_01675
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: ARA74663
Position
380937..382340
AA seq 467 aa
MSNLFSFAAVSSLPVAQAHWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSLQELKDALRAG
CDGARLCATGPAKTREFLTALVHHRALIVLDSPEEFDEVLALADLLRVTDPVRVLLRYRP
SFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGYDPDTRVAAFAEVLPLLERA
RSKGLQPAIIDIGGGLPIQYLSASRYQDYLAKQNAADYRHGQVPTSFYPYGGERSAVDYL
EAFLSASIGQDRVADVLKQHGLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTPLAPGKAWIAGHSCLDDDVITNRLIHFRTVPQ
SGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagcaacctgtttagctttgccgcagtgtcttccctccctgtcgcgcaggcccactgg
cctgagagactgacgccttatctggatagtgagattgagcagtttcttttcaactcgccg
caaaggctgtcgtggctggttgagcagtatgggtcgccgctgaatattgtctggccgcac
accgtggccaacaatatcgcggcattgcggacagtgttgcagcgtcacgacgtggattgc
cgcctgtactacggcgcgaaggtgaacaaatcgccggggctggttcaggcggcggttaac
gcgggcgttggcgtggatgtttccagcttacaggaactgaaagatgcgctgcgggcaggc
tgcgacggcgcgcggctgtgcgccaccggtccggccaaaacgcgtgagttcctgacagcg
ctggttcatcatcgcgctcttatcgtgctggattcaccggaagagttcgacgaggtgctc
gcgctggcggatttgctgcgcgtgacggatcccgtgcgggttctgctgcgctatcgcccg
tcgttcgcgcaggccagtcggtttggcatgctggccgatgaggttgcaatctgtctggag
gcgttgagcaccagacaggctgtgcttcatctggaaggcttccatttccatctcggcggc
tatgatcccgatacccgcgtggcggcatttgctgaggtcctgccattactggagcgggca
cgctcaaagggattgcagcccgcgattattgatatcggcgggggattgccgattcaatat
ctttcggcttcacgctatcaggattatttagcgaagcagaatgcggcggattaccgccac
ggtcaggtgccgacctcgttttacccatatggcggtgagcgttcggctgtcgactatctt
gaggcattcctgtccgcctcaatcggacaggatcgcgtagcggacgtgctcaagcagcac
ggcctgattctggcgattgagccgggacgcagcctcgctgaccaaagtgcgattaccgtg
tttcgcgtcacgcgcacgcgccgccagccggatggcaaccacgtcgtgtttgtggaaggc
agcagcttcagcgcgtgtgaaacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacgcctctggcaccgggcaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcgaaccgtgccgcag
tcaggcgatttactgatttacgcgaatacggcgggataccagatggacctgctggaaaac
gcgtttcatcggcatccgctgcctgcgcgcctgtgtgcgttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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