KEGG   Pectobacterium brasiliense: B5S52_02280
Entry
B5S52_02280       CDS       T06364                                 
Name
(GenBank) P-type conjugative transfer protein TrbG
  KO
K20532  type IV secretion system protein TrbG
Organism
pbra  Pectobacterium brasiliense
Pathway
pbra02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B5S52_02280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbra02044]
    B5S52_02280
Secretion system [BR:pbra02044]
 Type IV secretion system
  Trb secretion system protein
   B5S52_02280
SSDB
Motif
Pfam: CagX RNA_pol_Rpb5_C
Other DBs
NCBI-ProteinID: ARA74780
Position
507812..508816
AA seq 334 aa
MNARFRKTALPLILLASTVLFAGCATQGKPPPVISLDEPVQAQPLHEPPKPIEVVAVPEP
LALPAQLKPLPEVDAAPAAPEPADEKVRVSRANAEARIAPTRDGYVNAIQVWPFTDGALY
QVYASVGRVTVIALQPGEDLVTVAAGDTVRWIVGDTSSGSGADLRVNVLVKPIRSGLKTN
LVITTSRRTYLLELTSTDKAWMASVSWDYPKDRMLALQRQAQAANAAAPVDAGLSLENIR
FRYAISGSNPTWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGAQGDGQLVNYRFRSPY
YIVDRLFGAAELRLGADKGDVVRIERTDGIAGRN
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgaatgcacgtttccgtaaaaccgcattgccgctgatcctgctggcatcgactgttctg
tttgcgggctgcgccacgcagggcaaaccgccgccggtgatctcgctggatgagccggtg
caggcccagccattgcacgagccgcccaaacccatcgaagtcgtcgcggtgcctgagccc
ttggcgctgcccgcacagttgaagccgctgccagaagtcgatgcggccccggctgcacct
gagcctgccgacgagaaggtgcgcgtctcccgcgccaatgccgaggcgcgcattgcgccg
acccgagatggctacgtcaatgcgatccaggtctggcctttcaccgatggcgcgctgtac
caggtctatgcgtcggtgggccgcgtgaccgtgatcgcgctccagcccggcgaggatctg
gtgacggtcgctgcgggcgataccgtgcgctggatcgtgggcgacacctccagcggcagt
ggggccgatttgcgcgtcaatgtgctggtcaagcccatccgctccgggttgaagaccaat
ctggtcatcaccaccagccgccgcacctatctgctggaactgacttcgaccgacaaggca
tggatggcgtcggtgtcctgggactatcccaaggatcggatgctggctttgcagcgccag
gcacaggctgccaacgctgccgcgccagtcgatgcgggtctgtcgttggagaacatccgc
tttcgctatgccatcagcggcagcaatccgacgtggaagccgctgcgagctttcgatgat
ggcgagaaggtctatatccagttcccggcaggcatcgcccagggcgagctgccgccgctg
ttcgtcatcggcgcgcagggcgacgggcaactggtgaattaccgctttcgctcgccgtac
tacatcgtggatcggctgttcggcgcggccgaactgcgcctgggggccgacaagggcgat
gtggtgcgcattgagcgcacggatggcatcgccgggaggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

Download RDF
DBGET integrated database retrieval system